RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SHBQ15464 509 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 PNLIPRP3Q17RR3 467 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 SMIM21Q3B7S5 101 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 ABI3BPQ7Z7G0 1075 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 OR2M3Q8NG83 312 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 ST8SIA1Q92185 356 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 RDH5Q92781 318 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 OXGR1Q96P68 337 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 LRFN3Q9BTN0 628 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 P4HTMQ9NXG6 502 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 C19orf53Q9UNZ5 99 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 TNFRSF10CO14798 259 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 BCL2L11O43521 198 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 OR4E1P0C645 316 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 KCNJ3P48549 501 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 DGCR2P98153 550 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 FAM26EQ8N5C1 309 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 EXD3Q8N9H8 876 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 CTRCQ99895 268 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 SLC5A6Q9Y289 635 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 TRAPPC1Q9Y5R8 145 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 MYH10P35580 1976 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 A0A0A6YYJ9 748 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 C5orf49A4QMS7 147 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 CLEC18AA5D8T8 446 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 CST5P28325 142 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 PCSK6P29122 969 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 CLN3Q13286 438 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 SPRED3Q2MJR0 410 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF528Q3MIS6 628 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 VWA1Q6PCB0 445 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 TCTEX1D1Q8N7M0 179 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 CLEC18CQ8NCF0 446 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 MORN4Q8NDC4 146 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 IFI44Q8TCB0 444 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM231Q9H6L2 316 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 THAP10Q9P2Z0 257 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 RCL1Q9Y2P8 373 aaKnown RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 NME1P15531 152 aaKnown RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 DIO1P49895 249 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 TRMT12Q53H54 448 aaKnown RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 DHRS7BQ6IAN0 325 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 ANKRD16Q6P6B7 361 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 SLC16A11Q8NCK7 471 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 PELI1Q96FA3 418 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 NUMBLQ9Y6R0 609 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 RIMBP3CA6NJZ7 1639 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 RIMBP3BA6NNM3 1639 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 PHRF1Q9P1Y6 1649 aaKnown RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 RIMBP3Q9UFD9 1639 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 UBR1Q8IWV7 1749 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 COL2A1P02458 1487 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 FIGNL2A6NMB9 653 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 OR2J2O76002 312 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 IGHV3-9P01782 118 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 PPP1CAP62136 330 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 NHLH1Q02575 133 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 NHLH2Q02577 135 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 ETFRF1Q6IPR1 90 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 Q6ZSR9 355 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 ARIH2OSQ8N7S6 290 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM99Q8N816 258 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 OR4F17Q8NGA8 305 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 SLCO4A1Q96BD0 722 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 GPR84Q9NQS5 396 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 ASH2LQ9UBL3 628 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF346Q9UL40 294 aaKnown RBP8.18□□□□□ -1.1
BRCA1-205ENST00000461221 GABRB1P18505 474 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 GCAP28676 217 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 PFN3P60673 137 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 UQCC3Q6UW78 93 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 TAS1R1Q7RTX1 841 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 YRDCQ86U90 279 aaKnown RBP8.17□□□□□ -1.1
BRCA1-205ENST00000461221 ARFGAP1Q8N6T3 406 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 BCORP1Q8N888 145 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM56Q96MV1 263 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 PTDSS2Q9BVG9 487 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 PCED1AQ9H1Q7 454 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 ANKRD10Q9NXR5 420 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 TRGV10A0A0A0MS01 117 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 SULT1A3P0DMM9 295 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 SULT1A4P0DMN0 295 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF26P17031 533 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-205ENST00000461221 ZBTB25P24278 435 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 PIGPP57054 158 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 DEFB103AP81534 67 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF154Q13106 437 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 MYBPHQ13203 477 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 DUSP5Q16690 384 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 WFDC8Q8IUA0 241 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 DND1Q8IYX4 353 aaKnown RBP8.17□□□□□ -1.1
BRCA1-205ENST00000461221 BATF2Q8N1L9 274 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 OR5M1Q8NGP8 315 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-205ENST00000461221 WBP2Q969T9 261 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 C12orf57Q99622 126 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 CHST2Q9Y4C5 530 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 ANKRD26Q9UPS8 1709 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF716A6NP11 495 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 CD22P20273 847 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms