RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 HIST3H3Q16695 136 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 ZNF730Q6ZMV8 503 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 NOXO1Q8NFA2 376 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 OR4C15Q8NGM1 316 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 MRAPQ8TCY5 172 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 GIPC3Q8TF64 312 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 NRBF2Q96F24 287 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 MPP4Q96JB8 637 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 CIB1Q99828 191 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 TNFRSF13BO14836 293 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-202ENST00000461127 CASQ2O14958 399 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-202ENST00000461127 ICMTO60725 284 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 CH25HO95992 272 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 THY1P04216 161 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 PEX2P28328 305 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 PITPNBP48739 271 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 HMGA2P52926 109 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 LAPTM4AQ15012 233 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 ZNF74Q16587 644 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 LRRC36Q1X8D7 754 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 MICAQ29983 383 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 C10orf128Q5T292 105 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 LPCAT4Q643R3 524 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 ZBTB49Q6ZSB9 765 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 VASH1Q7L8A9 365 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-202ENST00000461127 TMEM179BQ7Z7N9 219 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 NKAIN4Q8IVV8 208 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 LINC00471Q8N535 108 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 OR10G2Q8NGC3 310 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 ACOT11Q8WXI4 607 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-202ENST00000461127 C4orf45Q96LM5 186 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 OR2V2Q96R30 315 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 VCXQ9H320 206 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 KRCC1Q9NPI7 259 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-202ENST00000461127 CLN8Q9UBY8 286 aa14.35□□□□□ -0.11
TOP3A-202ENST00000461127 TET2Q6N021 2002 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-202ENST00000461127 A0A1W2PRG6 482 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 OR10H3O60404 316 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 LYPD3O95274 346 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 FUT4P22083 530 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 TUBG1P23258 451 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 IFNGR2P38484 337 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 RBM34P42696 430 aaKnown RBP14.34□□□□□ -0.11
TOP3A-202ENST00000461127 MMP16P51512 607 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 LOXL3P58215 753 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 ERVK-25P63136 954 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 PSG4Q00888 419 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 SGCAQ16586 387 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 OGFRL1Q5TC84 451 aaPredicted RBP14.34□□□□□ -0.11
TOP3A-202ENST00000461127 SAMD5Q5TGI4 173 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 RUSC1-AS1Q66K80 236 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 TTC33Q6PID6 262 aaPredicted RBP14.34□□□□□ -0.11
TOP3A-202ENST00000461127 GDPGP1Q6ZNW5 385 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 CBR4Q8N4T8 237 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 NPEPL1Q8NDH3 523 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 SLC7A13Q8TCU3 470 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 TMEM255BQ8WV15 326 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 GATAD2BQ8WXI9 593 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 PCGF1Q9BSM1 259 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 MRPL13Q9BYD1 178 aaKnown RBP14.34□□□□□ -0.11
TOP3A-202ENST00000461127 TMEM165Q9HC07 324 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 GCM1Q9NP62 436 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 TUBG2Q9NRH3 451 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 ZNF229Q9UJW7 825 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 MED31Q9Y3C7 131 aa14.34□□□□□ -0.11
TOP3A-202ENST00000461127 PLXNB1O43157 2135 aa14.33□□□□□ -0.11
TOP3A-202ENST00000461127 A0A087WUU8 490 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 ENSAO43768 121 aaKnown RBP14.33□□□□□ -0.12
TOP3A-202ENST00000461127 OPN1MWP04001 364 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 OPN1MW2P0DN77 364 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 OPN1MW3P0DN78 364 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 NR2C1P13056 603 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 CDAP32320 146 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 DAP3P51398 398 aaKnown RBP14.33□□□□□ -0.12
TOP3A-202ENST00000461127 SEC23BQ15437 767 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 VAX1Q5SQQ9 334 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 NANOGNBQ7Z5D8 188 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 HS3ST5Q8IZT8 346 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 ATG16L2Q8NAA4 619 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 ZSCAN4Q8NAM6 433 aaPredicted RBP14.33□□□□□ -0.12
TOP3A-202ENST00000461127 TMEM239Q8WW34 195 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 NRG4Q8WWG1 115 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 PPP1R14AQ96A00 147 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 PRSS27Q9BQR3 290 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 OR2H1Q9GZK4 316 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 SMURF2Q9HAU4 748 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 C8orf4Q9NR00 106 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 ACOXLQ9NUZ1 547 aa14.33□□□□□ -0.12
TOP3A-202ENST00000461127 ARRDC5A6NEK1 342 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 BLOC1S5-TXNDC5H3BN57 136 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 P2RY10O00398 339 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 KPNA4O00629 521 aaPredicted RBP14.32□□□□□ -0.12
TOP3A-202ENST00000461127 PHYHO14832 338 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 ZNF205O95201 554 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 ABHD16AO95870 558 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 ANXA8P13928 327 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 ACADSP16219 412 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 KITLGP21583 273 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 PRKACGP22612 351 aa14.32□□□□□ -0.12
TOP3A-202ENST00000461127 VHLP40337 213 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms