RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 R4GMQ9 66 aa9.54□□□□□ -0.88
SMNDC1-203ENST00000460483 LOC100509620A0A075B734 347 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 PLSCR5A0PG75 271 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 ZNF503-AS2A6NEH8 195 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 DEFB108AA8MXU0 73 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 APOL3O95236 402 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 HTR1AP08908 422 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 ACSM4P0C7M7 580 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 UBCP0CG48 685 aaKnown RBP9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 RNF224P0DH78 156 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 APOBEC3AP31941 199 aaPredicted RBP9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 TGM4P49221 684 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 EVX1P49640 407 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 CCR9P51686 369 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 PRKXP51817 358 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 SNTB2Q13425 540 aaKnown RBP9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 SNTB1Q13884 538 aaKnown RBP9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 BCL2L15Q5TBC7 163 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 LIPNQ5VXI9 398 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 C20orf204Q6ZNR8 217 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 PGAP1Q75T13 922 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 MRPL21Q7Z2W9 205 aaKnown RBP9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 OR1J1Q8NGS3 322 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 C4orf36Q96KX1 117 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 DHRS9Q9BPW9 319 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 TMEM204Q9BSN7 226 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 SLC22A4Q9H015 551 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 NEK6Q9HC98 313 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 FKBP14Q9NWM8 211 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 BABAM2Q9NXR7 383 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 CISD1Q9NZ45 108 aaKnown RBP9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 GTF2A1LQ9UNN4 478 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 MED12LQ86YW9 2145 aa9.53□□□□□ -0.88
SMNDC1-203ENST00000460483 MPDZO75970 2070 aa9.52□□□□□ -0.88
SMNDC1-203ENST00000460483 NCOA6Q14686 2063 aaPredicted RBP9.52□□□□□ -0.88
SMNDC1-203ENST00000460483 MYO7BQ6PIF6 2116 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 A0A087WXM4 84 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 A0A0U1RQV5 110 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 ATP6V1G2-DDX39BF2Z307 99 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 TBX1O43435 398 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 SMPD2O60906 423 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 CTAG2O75638 210 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 CELA3BP08861 270 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 RAC2P15153 192 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 SERPINF1P36955 418 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 FABP6P51161 128 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 HCCSP53701 268 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 WNT4P56705 351 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 KLF3P57682 345 aaPredicted RBP9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 ZNF121P58317 390 aaPredicted RBP9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 PPP1CBP62140 327 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 BDH1Q02338 343 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 MZT1Q08AG7 82 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 KRTAP27-1Q3LI81 207 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 ZNF672Q499Z4 452 aaPredicted RBP9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 FAM209AQ5JX71 171 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 TMEM244Q5VVB8 128 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 OTPQ5XKR4 325 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 RPL22L1Q6P5R6 122 aaKnown RBP9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 COLCA1Q6ZS62 124 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 COMMD2Q86X83 199 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 SYNPRQ8TBG9 265 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 MS4A5Q9H3V2 200 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 PLK3Q9H4B4 646 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 ABCB9Q9NP78 766 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 NUFIP1Q9UHK0 495 aaKnown RBP9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 MRM2Q9UI43 246 aaKnown RBP9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 OR52A1Q9UKL2 312 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 COPS3Q9UNS2 423 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 PMF1-BGLAPU3KQ54 211 aa9.52□□□□□ -0.89
SMNDC1-203ENST00000460483 A0A1B0GVI7 797 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 FAM221AA4D161 298 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 TMEM212A6NML5 194 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 B9A039 149 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 HS3ST1O14792 307 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 RPP14O95059 124 aaKnown RBP9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 FAM157BP0CG42 384 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 LIMS3P0CW19 117 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 LIMS4P0CW20 117 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 CCL2P13500 99 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 SNRPD2P62316 118 aaKnown RBP9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 ZNF85Q03923 595 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 SPHARQ15513 63 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 MED22Q15528 200 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 TBCEQ15813 527 aaPredicted RBP9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 TP53I3Q53FA7 332 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 ZNF684Q5T5D7 378 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 MBNL2Q5VZF2 373 aaKnown RBP9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 FDX2Q6P4F2 183 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 C22orf34Q6ZV56 151 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 FAM57BQ71RH2 274 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 NANOGP1Q8N7R0 232 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 ZNF611Q8N823 705 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 CSNK2A3Q8NEV1 391 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 OR10S1Q8NGN2 331 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 SPRYD4Q8WW59 207 aaPredicted RBP9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 DIRC2Q96SL1 478 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 ISYNA1Q9NPH2 558 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 UBAP1Q9NZ09 502 aa9.51□□□□□ -0.89
SMNDC1-203ENST00000460483 KLHDC2Q9Y2U9 406 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms