RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 SEMG2Q02383 582 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 STUMQ69YW2 141 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 SLC25A25Q6KCM7 469 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 FBXW12Q6X9E4 464 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 SAXO1Q8IYX7 474 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 OR5W2Q8NH69 310 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 GLYATL2Q8WU03 294 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 APH1BQ8WW43 257 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 SEH1LQ96EE3 360 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 ZNF681Q96N22 645 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 KCNS3Q9BQ31 491 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 LYRM4Q9HD34 91 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 PPIL1Q9Y3C6 166 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 RHBDD3Q9Y3P4 386 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 NACAE9PAV3 2078 aa3.46□□□□□ -1.86
CCDC50-203ENST00000460064 DENND4AQ7Z401 1863 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 PIKFYVEQ9Y2I7 2098 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 COL22A1Q8NFW1 1626 aaPredicted RBP3.45□□□□□ -1.86
CCDC50-203ENST00000460064 A0A0J9YYE9 177 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 SULT1B1O43704 296 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 MED6O75586 246 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 OR5F1O95221 314 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 SNAI1O95863 264 aaPredicted RBP3.45□□□□□ -1.86
CCDC50-203ENST00000460064 TRBC1P01850 177 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 RPSAP08865 295 aaKnown RBP3.45□□□□□ -1.86
CCDC50-203ENST00000460064 UBCP0CG48 685 aaKnown RBP3.45□□□□□ -1.86
CCDC50-203ENST00000460064 ZNF823P16415 610 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 PGAM1P18669 254 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 TNFSF9P41273 254 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 BCAP31P51572 246 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 UBE2MP61081 183 aaKnown RBP3.45□□□□□ -1.86
CCDC50-203ENST00000460064 UBE2NP61088 152 aaKnown RBP3.45□□□□□ -1.86
CCDC50-203ENST00000460064 CDH17Q12864 832 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 PON2Q15165 354 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 UBE2SQ16763 222 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 BEX5Q5H9J7 111 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 TPTE2P1Q5T6R2 138 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 CLEC6AQ6EIG7 209 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 TRMT10CQ7L0Y3 403 aaKnown RBP3.45□□□□□ -1.86
CCDC50-203ENST00000460064 VTCN1Q7Z7D3 282 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 LINC00523Q86TU6 105 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 PGAM4Q8N0Y7 254 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 CBR4Q8N4T8 237 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 METTL13Q8N6R0 699 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 CYB561D1Q8N8Q1 229 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 SNX31Q8N9S9 440 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 CHST4Q8NCG5 386 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 OR52E2Q8NGJ4 325 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 ANGPTL6Q8NI99 470 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 NDNFQ8TB73 568 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 ABHD3Q8WU67 409 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 GALNT14Q96FL9 552 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 COL21A1Q96P44 957 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 ANKRD60Q9BZ19 345 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 PIGUQ9H490 435 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 TMEM38AQ9H6F2 299 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 LRRC19Q9H756 370 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 NTN4Q9HB63 628 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 ACP6Q9NPH0 428 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 PXMP2Q9NR77 195 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 EURLQ9NYK6 297 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 AHSPQ9NZD4 102 aa3.45□□□□□ -1.86
CCDC50-203ENST00000460064 BZW2Q9Y6E2 419 aaKnown RBP3.45□□□□□ -1.86
CCDC50-203ENST00000460064 MROH7-TTC4A0A0A0MT08 1334 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 EVC2Q86UK5 1308 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 RAD51CO43502 376 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 CDC40O60508 579 aaKnown RBP eCLIP3.44□□□□□ -1.86
CCDC50-203ENST00000460064 NDUFS6O75380 124 aaKnown RBP3.44□□□□□ -1.86
CCDC50-203ENST00000460064 FCN3O75636 299 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 HLA-HP01893 362 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 HBE1P02100 147 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 IFNW1P05000 195 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 CD3GP09693 182 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 CTRB1P17538 263 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 MSR1P21757 451 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 P2RX1P51575 399 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 DAOAP59103 153 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 DSTNP60981 165 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 YWHAEP62258 255 aaKnown RBP3.44□□□□□ -1.86
CCDC50-203ENST00000460064 DR1Q01658 176 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 IRF8Q02556 426 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 RAD51Q06609 339 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 GPR176Q14439 515 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 PTGES3Q15185 160 aaKnown RBP3.44□□□□□ -1.86
CCDC50-203ENST00000460064 STK38Q15208 465 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 MLIPQ5VWP3 458 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 MBOAT2Q6ZWT7 520 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 NDUFAF7Q7L592 441 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 COPS6Q7L5N1 327 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 ABHD12BQ7Z5M8 362 aaPredicted RBP3.44□□□□□ -1.86
CCDC50-203ENST00000460064 NPWQ8N729 165 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 OR56A4Q8NGH8 313 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 OR52E5Q8NH55 327 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 ZNF461Q8TAF7 563 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 ERMNQ8TAM6 284 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 GPX8Q8TED1 209 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 RAB1CQ92928 201 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 NTAN1Q96AB6 310 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 JSRP1Q96MG2 331 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms