RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 CPOQ8IVL8 374 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 OR5AS1Q8N127 324 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 ST7LQ8TDW4 575 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 ZMYND19Q96E35 227 aaPredicted RBP17.63■□□□□ 0.41
VARS-218ENST00000459667 POM121Q96HA1 1249 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 CIB1Q99828 191 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 EGLN1Q9GZT9 426 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 CENPMQ9NSP4 180 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 TVP23BQ9NYZ1 205 aa17.63■□□□□ 0.41
VARS-218ENST00000459667 PPIHO43447 177 aaKnown RBP17.62■□□□□ 0.41
VARS-218ENST00000459667 CD55P08174 381 aa17.62■□□□□ 0.41
VARS-218ENST00000459667 OTX1P32242 354 aaPredicted RBP17.62■□□□□ 0.41
VARS-218ENST00000459667 TNFAIP6P98066 277 aaPredicted RBP17.62■□□□□ 0.41
VARS-218ENST00000459667 CDK5R2Q13319 367 aa17.62■□□□□ 0.41
VARS-218ENST00000459667 OR2T2Q6IF00 324 aa17.62■□□□□ 0.41
VARS-218ENST00000459667 Q6ZR03 302 aa17.62■□□□□ 0.41
VARS-218ENST00000459667 SPATC1Q76KD6 591 aa17.62■□□□□ 0.41
VARS-218ENST00000459667 CXXC5Q7LFL8 322 aaKnown RBP17.62■□□□□ 0.41
VARS-218ENST00000459667 TIGD4Q8IY51 512 aa17.62■□□□□ 0.41
VARS-218ENST00000459667 BBS1Q8NFJ9 593 aa17.62■□□□□ 0.41
VARS-218ENST00000459667 ELMOD3Q96FG2 381 aa17.62■□□□□ 0.41
VARS-218ENST00000459667 A8MV72 311 aaPredicted RBP17.61■□□□□ 0.41
VARS-218ENST00000459667 TNFSF4P23510 183 aa17.61■□□□□ 0.41
VARS-218ENST00000459667 RPS7P62081 194 aaKnown RBP17.61■□□□□ 0.41
VARS-218ENST00000459667 MALLQ13021 153 aa17.61■□□□□ 0.41
VARS-218ENST00000459667 HFEQ30201 348 aa17.61■□□□□ 0.41
VARS-218ENST00000459667 DRAM2Q6UX65 266 aa17.61■□□□□ 0.41
VARS-218ENST00000459667 SHFQ7M4L6 423 aa17.61■□□□□ 0.41
VARS-218ENST00000459667 OR2Z1Q8NG97 314 aa17.61■□□□□ 0.41
VARS-218ENST00000459667 KCNJ15Q99712 375 aa17.61■□□□□ 0.41
VARS-218ENST00000459667 CACNG2Q9Y698 323 aa17.61■□□□□ 0.41
VARS-218ENST00000459667 NIPBLQ6KC79 2804 aaeCLIP17.6■□□□□ 0.41
VARS-218ENST00000459667 ZAR1LA6NP61 321 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 SELENOFO60613 162 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 SELEP16581 610 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 IL2RGP31785 369 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 PRKXP51817 358 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 GRB2P62993 217 aaKnown RBP17.6■□□□□ 0.41
VARS-218ENST00000459667 GK2Q14410 553 aaPredicted RBP17.6■□□□□ 0.41
VARS-218ENST00000459667 SLC35D3Q5M8T2 416 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 SLX4IPQ5VYV7 408 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 OR8G5Q8NG78 346 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 ZNF582Q96NG8 517 aaPredicted RBP17.6■□□□□ 0.41
VARS-218ENST00000459667 C9orf16Q9BUW7 83 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 ABHD6Q9BV23 337 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 RIBC2Q9H4K1 309 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 NARFLQ9H6Q4 476 aa17.6■□□□□ 0.41
VARS-218ENST00000459667 TMEFF2Q9UIK5 374 aaPredicted RBP17.6■□□□□ 0.41
VARS-218ENST00000459667 TANC2Q9HCD6 1990 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 IQCF6A8MYZ5 107 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 CLDN25C9JDP6 229 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 BAG2O95816 211 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 SLC2A5P22732 501 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 SLC15A1P46059 708 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 RAD23AP54725 363 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 PRSS12P56730 875 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 APOFQ13790 326 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 SNAI3Q3KNW1 292 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 SPRNQ5BIV9 151 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 PQLC1Q8N2U9 271 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 ZNF283Q8N7M2 679 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 BHLHE23Q8NDY6 225 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 RNF133Q8WVZ7 376 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 CCL17Q92583 94 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 HPS1Q92902 700 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 MSI2Q96DH6 328 aaKnown RBP17.59■□□□□ 0.41
VARS-218ENST00000459667 SOX7Q9BT81 388 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 GABARAPL3Q9BY60 117 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 USE1Q9NZ43 259 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 TREM2Q9NZC2 230 aa17.59■□□□□ 0.41
VARS-218ENST00000459667 SONP18583 2426 aaKnown RBP17.58■□□□□ 0.41
VARS-218ENST00000459667 LOC100289279A0A1B0GTE1 492 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 EI24O14681 340 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 PRKYO43930 277 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 SLC2A1P11166 492 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 HSD11B1P28845 292 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 EPHA2P29317 976 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 NAA10P41227 235 aaPredicted RBP17.58■□□□□ 0.4
VARS-218ENST00000459667 ALDH3A2P51648 485 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 AVPI1Q5T686 147 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 PGAP1Q75T13 922 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 MRPL21Q7Z2W9 205 aaKnown RBP17.58■□□□□ 0.4
VARS-218ENST00000459667 CLDND2Q8NHS1 167 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 OTOSQ8NHW6 89 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 AMELYQ99218 206 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 TOR3AQ9H497 397 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 H2AFY2Q9P0M6 372 aaPredicted RBP17.58■□□□□ 0.4
VARS-218ENST00000459667 IL19Q9UHD0 177 aa17.58■□□□□ 0.4
VARS-218ENST00000459667 M0R129 80 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 WNT9BO14905 357 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 ALPLP05186 524 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 LYNP07948 512 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 TNFRSF1AP19438 455 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 ANOS1P23352 680 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 CX3CR1P49238 355 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 MVKQ03426 396 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 LCN1P1Q5VSP4 162 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 C12orf73Q69YU5 71 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 FAM166AQ6J272 317 aa17.57■□□□□ 0.4
VARS-218ENST00000459667 ZNF454Q8N9F8 522 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms