RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 EXOGQ9Y2C4 368 aaKnown RBP12.1□□□□□ -0.47
SMPD4-215ENST00000457039 LRP12Q9Y561 859 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 PMF1-BGLAPU3KQ54 211 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 USF3Q68DE3 2245 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 A0A1W2PQL4 384 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF670-ZNF695F2Z2N8 137 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 IGHV4-39P01824 125 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 APOC1P02654 83 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 LCATP04180 440 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 SLC2A1P11166 492 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 BMP4P12644 408 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 HSD11B1P28845 292 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 GCH1P30793 250 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 SLC6A9P48067 706 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 PSMA6P60900 246 aaKnown RBP12.09□□□□□ -0.47
SMPD4-215ENST00000457039 EGR3Q06889 387 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 PSG7Q13046 419 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 SMN1Q16637 294 aaKnown RBP12.09□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF684Q5T5D7 378 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF322Q6U7Q0 402 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-215ENST00000457039 KRT77Q7Z794 578 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF679Q8IYX0 411 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF283Q8N7M2 679 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 OR5L1Q8NGL2 311 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 CNIH3Q8TBE1 160 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 HAVCR1Q96D42 359 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 LGALS12Q96DT0 336 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 NIPAL2Q9H841 368 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 AMBNQ9NP70 447 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 PTTG3PQ9NZH4 202 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
SMPD4-215ENST00000457039 A0A1W2PPW3 197 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 M0R233 179 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 PSMD9O00233 223 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 NDUFS7O75251 213 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 ZNF254O75437 659 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 RAC2P15153 192 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 KITLGP21583 273 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 DCTDP32321 178 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 ATP6V1E1P36543 226 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 ALDH3B1P43353 468 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 MMP15P51511 669 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 ART1P52961 327 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 ZNF121P58317 390 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 SELENOVP59797 346 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 ZNF85Q03923 595 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 GK2Q14410 553 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 HLXQ14774 488 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 ALKBH6Q3KRA9 238 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 C6orf52Q5T4I8 152 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 LAIR2Q6ISS4 152 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 C8orf59Q8N0T1 100 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 ZCCHC24Q8N2G6 241 aaKnown RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 OR10H4Q8NGA5 316 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 CMBLQ96DG6 245 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 TRMT61AQ96FX7 289 aaKnown RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 PERPQ96FX8 193 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 SORCS2Q96PQ0 1159 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 TBX5Q99593 518 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 MROQ9BYG7 248 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 TTTY10Q9BZA0 68 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 ZNF319Q9P2F9 582 aa12.08□□□□□ -0.48
SMPD4-215ENST00000457039 MRM2Q9UI43 246 aaKnown RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 RPL36Q9Y3U8 105 aaKnown RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 PRRC2AP48634 2157 aaKnown RBP12.08□□□□□ -0.48
SMPD4-215ENST00000457039 MYO9AB2RTY4 2548 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 MAGEB4O15481 346 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-215ENST00000457039 SRSF10O75494 262 aaKnown RBP12.07□□□□□ -0.48
SMPD4-215ENST00000457039 IGHA1P01876 353 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 ADRA2AP08913 450 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 ATP5J2P56134 94 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 ACTC1P68032 377 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 ACTA1P68133 377 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 RAB40BQ12829 278 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 CDK5R2Q13319 367 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 MOGQ16653 247 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 GLYATL3Q5SZD4 288 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 IZUMO2Q6UXV1 221 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 SPSB4Q96A44 273 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 ZNF649Q9BS31 505 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 DYNLRB1Q9NP97 96 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 FAM206AQ9NX38 181 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 PURGQ9UJV8 347 aaKnown RBP12.07□□□□□ -0.48
SMPD4-215ENST00000457039 PCDHGB1Q9Y5G3 927 aa12.07□□□□□ -0.48
SMPD4-215ENST00000457039 ARID1AO14497 2285 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 ANXA2P07355 339 aaKnown RBP12.06□□□□□ -0.48
SMPD4-215ENST00000457039 NAT2P11245 290 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 VHLP40337 213 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 MMP16P51512 607 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 RIDAP52758 137 aaKnown RBP12.06□□□□□ -0.48
SMPD4-215ENST00000457039 ZNF92Q03936 586 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 MALLQ13021 153 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 NKPD1Q17RQ9 610 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 PRSS57Q6UWY2 283 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 FAM57BQ71RH2 274 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 THAP5Q7Z6K1 395 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 OR52H1Q8NGJ2 320 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 OR2AE1Q8NHA4 323 aa12.06□□□□□ -0.48
SMPD4-215ENST00000457039 GTF3AQ92664 365 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms