RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	TMEM178B	H3BS89	294 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	IFNL4	K9M1U5	179 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	SURF4	O15260	269 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	GPR137B	O60478	399 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	OR7A10	O76100	309 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	PRB2	P02812	416 aa	Predicted RBP	10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	GPR4	P46093	362 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	CLRN1	P58418	232 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	PRKCD	Q05655	676 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	PSG7	Q13046	419 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	MELK	Q14680	651 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	FAM189A2	Q15884	450 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZNF74	Q16587	644 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	SAMD5	Q5TGI4	173 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	KLB	Q86Z14	1044 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	AQP11	Q8NBQ7	271 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	OR2Z1	Q8NG97	314 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	OR9Q2	Q8NGE9	314 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	TBC1D15	Q8TC07	691 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	NRBF2	Q96F24	287 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	FAM46A	Q96IP4	442 aa	Known RBP	10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	FUZ	Q9BT04	418 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZNF556	Q9HAH1	456 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	NANS	Q9NR45	359 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	C20orf141	Q9NUB4	165 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	KIF17	Q9P2E2	1029 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	MIOX	Q9UGB7	285 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	IL19	Q9UHD0	177 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	OAZ3	Q9UMX2	235 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	NOTCH3	Q9UM47	2321 aa		10.98	□□□□□ -0.65
SNHG17-208	ENST00000456953	TNFRSF13B	O14836	293 aa	Predicted RBP	10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	IGF2	P01344	180 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZNF32	P17041	273 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	FUT1	P19526	365 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	PRKACG	P22612	351 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	OMP	P47874	163 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	FGF12	P61328	243 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	MRPS34	P82930	218 aa	Known RBP	10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	SLC27A4	Q6P1M0	643 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	TMEM179B	Q7Z7N9	219 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	HS3ST5	Q8IZT8	346 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	ATG16L2	Q8NAA4	619 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	NOXO1	Q8NFA2	376 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	AKR7L	Q8NHP1	331 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	GNPDA2	Q8TDQ7	276 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	EME1	Q96AY2	570 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	NEIL1	Q96FI4	390 aa	Predicted RBP	10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	FEV	Q99581	238 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	NUDT16L1	Q9BRJ7	211 aa	Known RBP	10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	MRPL13	Q9BYD1	178 aa	Known RBP	10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	RNPEPL1	Q9HAU8	725 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	ELOVL3	Q9HB03	270 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	TMEM165	Q9HC07	324 aa		10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	STX18	Q9P2W9	335 aa	Known RBP	10.97	□□□□□ -0.65
SNHG17-208	ENST00000456953	DNAH3	Q8TD57	4116 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	ARRDC5	A6NEK1	342 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	CENPBD1	B2RD01	187 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	OPN1MW	P04001	364 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	OPN1MW2	P0DN77	364 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	OPN1MW3	P0DN78	364 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	GSTM3	P21266	225 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	MMP16	P51512	607 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZNF133	P52736	654 aa	Predicted RBP	10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	PSG4	Q00888	419 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	RIPK1	Q13546	671 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	TAF11	Q15544	211 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	C10orf128	Q5T292	105 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	RUSC1-AS1	Q66K80	236 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	PGBD2	Q6P3X8	592 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	ARL9	Q6T311	187 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953		Q6ZR03	302 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	TMPRSS11F	Q6ZWK6	438 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	NLRC3	Q7RTR2	1065 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	NANOGNB	Q7Z5D8	188 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	OAF	Q86UD1	273 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	ALDH16A1	Q8IZ83	802 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	MRAP	Q8TCY5	172 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	ITLN1	Q8WWA0	313 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	OR2V2	Q96R30	315 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	CIB1	Q99828	191 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	GCM1	Q9NP62	436 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	ZNF229	Q9UJW7	825 aa		10.96	□□□□□ -0.65
SNHG17-208	ENST00000456953	UNC119B	A6NIH7	251 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	PLXNB1	O43157	2135 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	FSTL3	O95633	263 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	ATP6V1G2	O95670	118 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	GAST	P01350	101 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	IGHV4-59	P01825	116 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	ANXA8	P13928	327 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	TUBG1	P23258	451 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	FPR3	P25089	353 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	CDA	P32320	146 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	PITPNB	P48739	271 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	LOXL3	P58215	753 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	SLC34A1	Q06495	639 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	VAX1	Q5SQQ9	334 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	C1orf94	Q6P1W5	598 aa		10.95	□□□□□ -0.66
SNHG17-208	ENST00000456953	HDDC2	Q7Z4H3	204 aa		10.95	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms