RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 SAMD4AQ9UPU9 718 aaKnown RBP13.37□□□□□ -0.27
GPC1-206ENST00000455111 TRAV40A0A0B4J280 105 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 F5H5K5 113 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 SURF4O15260 269 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 FAM20BO75063 409 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 GADD45GO95257 159 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 FSTL3O95633 263 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 RNASE1P07998 156 aaKnown RBP13.36□□□□□ -0.27
GPC1-206ENST00000455111 RPS2P15880 293 aaKnown RBP13.36□□□□□ -0.27
GPC1-206ENST00000455111 CRABP1P29762 137 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 PYCR1P32322 319 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 CD200P41217 278 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 SPIBQ01892 262 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 TRAP1Q12931 704 aaKnown RBP13.36□□□□□ -0.27
GPC1-206ENST00000455111 BAMBIQ13145 260 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 SLC27A4Q6P1M0 643 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 ZNF620Q6ZNG0 422 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 FITM2Q8N6M3 262 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 OR52E2Q8NGJ4 325 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 RAB40AQ8WXH6 277 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 MRI1Q9BV20 369 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 SPAG4Q9NPE6 437 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 ADA2Q9NZK5 511 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 OR5V1Q9UGF6 321 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 POLR1DQ9Y2S0 133 aa13.36□□□□□ -0.27
GPC1-206ENST00000455111 FAM32AQ9Y421 112 aaKnown RBP13.36□□□□□ -0.27
GPC1-206ENST00000455111 KIR2DS1A0A191URI9 304 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 PPIAL4GP0DN37 164 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 HSD17B1P14061 328 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 PRDX6P30041 224 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 RRM2P31350 389 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 SLC6A6P31641 620 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 OTX1P32242 354 aaPredicted RBP13.35□□□□□ -0.27
GPC1-206ENST00000455111 PSMB10P40306 273 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 SRP9P49458 86 aaKnown RBP13.35□□□□□ -0.27
GPC1-206ENST00000455111 SLC35F1Q5T1Q4 408 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 BRD3OSQ6XYD6 125 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 OR5L1Q8NGL2 311 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 OR2AE1Q8NHA4 323 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 Q8TCH9 128 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 SLCO4A1Q96BD0 722 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 NEIL1Q96FI4 390 aaPredicted RBP13.35□□□□□ -0.27
GPC1-206ENST00000455111 ATF6BQ99941 703 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 BTBD10Q9BSF8 475 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 IFT27Q9BW83 186 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 TMEM100Q9NV29 134 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 TMCC3Q9ULS5 477 aa13.35□□□□□ -0.27
GPC1-206ENST00000455111 MGAM2Q2M2H8 2515 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 TVP23AA6NH52 213 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 CLDN34H7C241 214 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 BHLHE40O14503 412 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 ARPC2O15144 300 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 PTBP3O95758 552 aaKnown RBP13.34□□□□□ -0.27
GPC1-206ENST00000455111 GNB2P62879 340 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 ELF3P78545 371 aaPredicted RBP13.34□□□□□ -0.27
GPC1-206ENST00000455111 ZNF92Q03936 586 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.34□□□□□ -0.27
GPC1-206ENST00000455111 FOXL1Q12952 345 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 DEFB112Q30KQ8 113 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 WDR25Q64LD2 544 aaPredicted RBP13.34□□□□□ -0.27
GPC1-206ENST00000455111 RUSC1-AS1Q66K80 236 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 ZNF770Q6IQ21 691 aaPredicted RBP13.34□□□□□ -0.27
GPC1-206ENST00000455111 PGM2L1Q6PCE3 622 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 DNM1P34Q6PK57 102 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 FGFRL1Q8N441 504 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 CYB561A3Q8NBI2 242 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 OR9Q2Q8NGE9 314 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 OR4C15Q8NGM1 316 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 PITX2Q99697 317 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 NDEL1Q9GZM8 345 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 PRDM13Q9H4Q3 707 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 PPP1R3EQ9H7J1 279 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 UNKLQ9H9P5 680 aaKnown RBP13.34□□□□□ -0.27
GPC1-206ENST00000455111 SMURF1Q9HCE7 757 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 UFSP2Q9NUQ7 469 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 ARL8BQ9NVJ2 186 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 VNN3Q9NY84 501 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 MIOXQ9UGB7 285 aa13.34□□□□□ -0.27
GPC1-206ENST00000455111 C3orf80F5H4A9 247 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 IFNL4K9M1U5 179 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 NDUFAB1O14561 156 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 OR10H3O60404 316 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 SNX3O60493 162 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 RENP00797 406 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 LCATP04180 440 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 MMP9P14780 707 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 MDKP21741 143 aaPredicted RBP13.33□□□□□ -0.28
GPC1-206ENST00000455111 PITPNBP48739 271 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 SRSF4Q08170 494 aaKnown RBP13.33□□□□□ -0.28
GPC1-206ENST00000455111 PPP1R8Q12972 351 aaKnown RBP13.33□□□□□ -0.28
GPC1-206ENST00000455111 TSPAN31Q12999 210 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 GLYATL3Q5SZD4 288 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 LRRN1Q6UXK5 716 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 OR51L1Q8NGJ5 315 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 CMTM5Q96DZ9 223 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 NUDT16L1Q9BRJ7 211 aaKnown RBP13.33□□□□□ -0.28
GPC1-206ENST00000455111 MS4A7Q9GZW8 240 aaPredicted RBP13.33□□□□□ -0.28
GPC1-206ENST00000455111 ZNF696Q9H7X3 374 aa13.33□□□□□ -0.28
GPC1-206ENST00000455111 SFTPBP07988 381 aa13.32□□□□□ -0.28
GPC1-206ENST00000455111 ATP6V1B2P21281 511 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms