RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 INTS14Q96SY0 518 aa21.08■□□□□ 0.97
MSH2-203ENST00000454849 SEMA6AQ9H2E6 1030 aa21.08■□□□□ 0.97
MSH2-203ENST00000454849 TUBG2Q9NRH3 451 aa21.08■□□□□ 0.97
MSH2-203ENST00000454849 TVP23BQ9NYZ1 205 aa21.08■□□□□ 0.97
MSH2-203ENST00000454849 KIAA1324LA8MWY0 1029 aaPredicted RBP21.07■□□□□ 0.96
MSH2-203ENST00000454849 HMGN1P05114 100 aa21.07■□□□□ 0.96
MSH2-203ENST00000454849 FASP25445 335 aa21.07■□□□□ 0.96
MSH2-203ENST00000454849 CRISP1P54107 249 aa21.07■□□□□ 0.96
MSH2-203ENST00000454849 GK2Q14410 553 aaPredicted RBP21.07■□□□□ 0.96
MSH2-203ENST00000454849 SNAI3Q3KNW1 292 aa21.07■□□□□ 0.96
MSH2-203ENST00000454849 ZMAT1Q5H9K5 638 aa21.07■□□□□ 0.96
MSH2-203ENST00000454849 HIPK1Q86Z02 1210 aa21.07■□□□□ 0.96
MSH2-203ENST00000454849 ITLN1Q8WWA0 313 aa21.07■□□□□ 0.96
MSH2-203ENST00000454849 PLEKHA8Q96JA3 519 aa21.07■□□□□ 0.96
MSH2-203ENST00000454849 AMELYQ99218 206 aa21.07■□□□□ 0.96
MSH2-203ENST00000454849 FAM157AC9JC47 383 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 G3V2T6 193 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 M0R129 80 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 SELENOFO60613 162 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 GLCEO94923 617 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 ADH4P08319 380 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 IGFBP5P24593 272 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 PCK2Q16822 640 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 OR2AE1Q8NHA4 323 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 ST7LQ8TDW4 575 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 ZNF582Q96NG8 517 aaPredicted RBP21.06■□□□□ 0.96
MSH2-203ENST00000454849 DDX28Q9NUL7 540 aaKnown RBP21.06■□□□□ 0.96
MSH2-203ENST00000454849 CGGBP1Q9UFW8 167 aaPredicted RBP21.06■□□□□ 0.96
MSH2-203ENST00000454849 KCNS2Q9ULS6 477 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 WIPI2Q9Y4P8 454 aa21.06■□□□□ 0.96
MSH2-203ENST00000454849 CLDN25C9JDP6 229 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 J3QW42 95 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 HLA-DPB1P04440 258 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 CD55P08174 381 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 EPHA2P29317 976 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 RPS7P62081 194 aaKnown RBP21.05■□□□□ 0.96
MSH2-203ENST00000454849 SNAPC1Q16533 368 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 CHRFAM7AQ494W8 412 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 TEX30Q5JUR7 227 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 LINC01356Q8N9X3 169 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 OR8G5Q8NG78 346 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 PYDC1Q8WXC3 89 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 HPS1Q92902 700 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 DIRC2Q96SL1 478 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 ABHD6Q9BV23 337 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 SLC25A19Q9HC21 320 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 KRT84Q9NSB2 600 aa21.05■□□□□ 0.96
MSH2-203ENST00000454849 TNFSF4P23510 183 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 NAA10P41227 235 aaPredicted RBP21.04■□□□□ 0.96
MSH2-203ENST00000454849 BLVRAP53004 296 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 HCCSP53701 268 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 LMO4P61968 165 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 MALLQ13021 153 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 TIGD4Q8IY51 512 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 ZNF283Q8N7M2 679 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 OR2V2Q96R30 315 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 BEX2Q9BXY8 128 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 DNAJC27Q9NZQ0 273 aa21.04■□□□□ 0.96
MSH2-203ENST00000454849 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.04■□□□□ 0.96
MSH2-203ENST00000454849 ISPDA4D126 451 aa21.03■□□□□ 0.96
MSH2-203ENST00000454849 CDH15P55291 814 aa21.03■□□□□ 0.96
MSH2-203ENST00000454849 ZNF92Q03936 586 aa21.03■□□□□ 0.96
MSH2-203ENST00000454849 KPNB1Q14974 876 aaKnown RBP21.03■□□□□ 0.96
MSH2-203ENST00000454849 PTGES3Q15185 160 aaKnown RBP21.03■□□□□ 0.96
MSH2-203ENST00000454849 GLYATL3Q5SZD4 288 aa21.03■□□□□ 0.96
MSH2-203ENST00000454849 PGAP1Q75T13 922 aa21.03■□□□□ 0.96
MSH2-203ENST00000454849 CXXC5Q7LFL8 322 aaKnown RBP21.03■□□□□ 0.96
MSH2-203ENST00000454849 MRPL21Q7Z2W9 205 aaKnown RBP21.03■□□□□ 0.96
MSH2-203ENST00000454849 BCDIN3DQ7Z5W3 292 aaKnown RBP21.03■□□□□ 0.96
MSH2-203ENST00000454849 DUS3LQ96G46 650 aaKnown RBP21.03■□□□□ 0.96
MSH2-203ENST00000454849 KCNJ15Q99712 375 aa21.03■□□□□ 0.96
MSH2-203ENST00000454849 SHARPINQ9H0F6 387 aa21.03■□□□□ 0.96
MSH2-203ENST00000454849 BRD7Q9NPI1 651 aa21.03■□□□□ 0.96
MSH2-203ENST00000454849 SAC3D1A6NKF1 404 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 IQCF6A8MYZ5 107 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 ZNF878C9JN71 531 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 F5H5P2 479 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 MLNRO43193 412 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 SELEP16581 610 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 OTX1P32242 354 aaPredicted RBP21.02■□□□□ 0.96
MSH2-203ENST00000454849 APOFQ13790 326 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 FAM120AOSQ5T036 256 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 DRAM2Q6UX65 266 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 ZDHHC13Q8IUH4 622 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 OR13G1Q8NGZ3 307 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 THEM6Q8WUY1 208 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 RAB1CQ92928 201 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 TIMD4Q96H15 378 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 TEX12Q9BXU0 123 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 MARCH7Q9H992 704 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 KLHDC2Q9Y2U9 406 aa21.02■□□□□ 0.96
MSH2-203ENST00000454849 TBX1O43435 398 aa21.01■□□□□ 0.95
MSH2-203ENST00000454849 PRKYO43930 277 aa21.01■□□□□ 0.95
MSH2-203ENST00000454849 SBK2P0C263 348 aa21.01■□□□□ 0.95
MSH2-203ENST00000454849 CX3CR1P49238 355 aa21.01■□□□□ 0.95
MSH2-203ENST00000454849 CR1LQ2VPA4 569 aa21.01■□□□□ 0.95
MSH2-203ENST00000454849 ZNF420Q8TAQ5 688 aaPredicted RBP21.01■□□□□ 0.95
MSH2-203ENST00000454849 SPRYD4Q8WW59 207 aaPredicted RBP21.01■□□□□ 0.95
MSH2-203ENST00000454849 DNAJC9Q8WXX5 260 aa21.01■□□□□ 0.95
MSH2-203ENST00000454849 SLC30A2Q9BRI3 323 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms