RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 OR11H4Q8NGC9 324 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 OR6K3Q8NGY3 331 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 HIST1H2ACQ93077 130 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 WACQ9BTA9 647 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 SF3B5Q9BWJ5 86 aaKnown RBP8.67□□□□□ -1.02
CCDC171-203ENST00000449575 REG4Q9BYZ8 158 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 PLA2G12AQ9BZM1 189 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 EGLN3Q9H6Z9 239 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 NPDC1Q9NQX5 325 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-203ENST00000449575 PLSCR4Q9NRQ2 329 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 EMC9Q9Y3B6 208 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 A8MXE2 369 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 CASKO14936 926 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 PRKYO43930 277 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 HPGDSO60760 199 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ZNF432O94892 652 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 CLDN14O95500 239 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 COL8A1P27658 744 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 CADP27708 2225 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 RAG2P55895 527 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ABCA4P78363 2273 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 FAM27E3Q08E93 113 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 CAMK2DQ13557 499 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 GPR176Q14439 515 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 P2RY14Q15391 338 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 TSPO2Q5TGU0 170 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 CARD17Q5XLA6 110 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 HIST2H2BCQ6DN03 193 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 NIPAL3Q6P499 406 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 C22orf34Q6ZV56 151 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 PXKQ7Z7A4 578 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 UEVLDQ8IX04 471 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ZNF837Q96EG3 531 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-203ENST00000449575 REPIN1Q9BWE0 567 aaKnown RBP8.67□□□□□ -1.02
CCDC171-203ENST00000449575 GLRX2Q9NS18 164 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 SLC7A10Q9NS82 523 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 EMC3Q9P0I2 261 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 CLEC2DQ9UHP7 191 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 HEATR1Q9H583 2144 aaKnown RBP8.67□□□□□ -1.02
CCDC171-203ENST00000449575 UNC119BA6NIH7 251 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 A8MXK9 166 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 IMPA2O14732 288 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 MRPL33O75394 65 aaKnown RBP8.67□□□□□ -1.02
CCDC171-203ENST00000449575 VAMP5O95183 116 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 OR6A2O95222 327 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 SOX14O95416 240 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 RAB36O95755 333 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 IL18BPO95998 194 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 APOC1P02654 83 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 CRHP06850 196 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 BIDP55957 195 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ZP4Q12836 540 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ALG10Q5BKT4 473 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 NHLRC3Q5JS37 347 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 C9orf135Q5VTT2 229 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 SLC35D2Q76EJ3 337 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 AAED1Q7RTV5 226 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 CDK20Q8IZL9 346 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 OR8D4Q8NGM9 314 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ASB5Q8WWX0 329 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 RFT1Q96AA3 541 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 SAV1Q9H4B6 383 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-203ENST00000449575 SLCO1C1Q9NYB5 712 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 PROCRQ9UNN8 238 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 FBN2P35556 2912 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 LOC102725191A0A1B0GVB3 256 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 M0R129 80 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 UPK3AO75631 287 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 FPR3P25089 353 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 OR3A2P47893 321 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 ERVK-25P63136 954 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 ACKR1Q16570 336 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 OCLNQ16625 522 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 LRFN4Q6PJG9 635 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 OR8J1Q8NGP2 316 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 SAMD8Q96LT4 415 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 ALKBH3Q96Q83 286 aaPredicted RBP8.66□□□□□ -1.02
CCDC171-203ENST00000449575 SLC38A2Q96QD8 506 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 ATF6BQ99941 703 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 OR52D1Q9H346 318 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 GP6Q9HCN6 339 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 MALT1Q9UDY8 824 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 TMEM5Q9Y2B1 443 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 MRPS7Q9Y2R9 242 aaKnown RBP8.66□□□□□ -1.02
CCDC171-203ENST00000449575 CSMD2Q7Z408 3487 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 A0A1B0GW55 424 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 SLC22A23A1A5C7 686 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 GPR171O14626 319 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 AKAP8O43823 692 aaKnown RBP8.66□□□□□ -1.02
CCDC171-203ENST00000449575 DUX4L2P0CJ85 424 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 DUX4L3P0CJ86 424 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 DUX4L4P0CJ87 422 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 DUX4L5P0CJ88 424 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 DUX4L6P0CJ89 424 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 DUX4L7P0CJ90 424 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 CD8BP10966 210 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 GABRA5P31644 462 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 CCKARP32238 428 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 WNT4P56705 351 aa8.66□□□□□ -1.02
CCDC171-203ENST00000449575 CTXN1P60606 82 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms