RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 U3KQ87 197 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 WDR87Q6ZQQ6 2873 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 CDH23Q9H251 3354 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 TCRBV16S1A1N1A0A5B0 115 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 ERVH48-1M5A8F1 160 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 SLC17A2O00624 439 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 XRCC3O43542 346 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 GMDSO60547 372 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 ITGB2P05107 769 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 OR4E1P0C645 316 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 GLULP15104 373 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 GNB3P16520 340 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 GCH1P30793 250 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 RPL23AP62750 156 aaKnown RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 PSG6Q00889 435 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 EXT1Q16394 746 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 PCK2Q16822 640 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 WDR38Q5JTN6 314 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 NLRC3Q7RTR2 1065 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 PRSS35Q8N3Z0 413 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 HSD17B11Q8NBQ5 300 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 OR1N1Q8NGS0 311 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 ANGPTL6Q8NI99 470 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 PBOV1Q9GZY1 135 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 PCYT1BQ9Y5K3 369 aaPredicted RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 CNOT1A5YKK6 2376 aaKnown RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 ZNF318Q5VUA4 2279 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 LOC285556D6RIA3 1793 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 OR5H14A6NHG9 310 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 TXNL1O43396 289 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 HPXP02790 462 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 CYB561P49447 251 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 FMODQ06828 376 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 PEA15Q15121 130 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 RAB11FIP2Q7L804 512 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 SFTPA2Q8IWL1 248 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 BHLHE23Q8NDY6 225 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 SEMA6DQ8NFY4 1073 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 RNF141Q8WVD5 230 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 S100PBPQ96BU1 408 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 ZNF285Q96NJ3 590 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 NMNAT2Q9BZQ4 307 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 VN1R1Q9GZP7 353 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 OBP2BQ9NPH6 170 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 DNAJB11Q9UBS4 358 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 LRP12Q9Y561 859 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 MDC1Q14676 2089 aaKnown RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 POLEQ07864 2286 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 IGHV3-15A0A0B4J1V0 119 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 CENPVL1A0A0U1RR11 272 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 HSPB2A8KAH6 182 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 SNRPGP15A8MWD9 76 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 M0R135 149 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 HRKO00198 91 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 SULT1C2O00338 296 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 BHLHE40O14503 412 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 IMPA2O14732 288 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 PHF1O43189 567 aaPredicted RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 SPINT1O43278 529 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 PIAS2O75928 621 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 VAMP5O95183 116 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 IGHEP01854 428 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 HOXC4P09017 264 aaPredicted RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 S100PP25815 95 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 OPRM1P35372 400 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 SERPINF1P36955 418 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 KIR2DL1P43626 348 aaPredicted RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 SLC25A1P53007 311 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 SNRPNP63162 240 aaKnown RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 ZNF85Q03923 595 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 HSPB2Q16082 182 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 LPCAT3Q6P1A2 487 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 SUMF1Q8NBK3 374 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 C11orf40Q8WZ69 217 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 ANKRD9Q96BM1 317 aaPredicted RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 WDR89Q96FK6 387 aaPredicted RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 ZNF799Q96GE5 643 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 MARVELD1Q9BSK0 173 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 NELFAQ9H3P2 528 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 ZNF768Q9H5H4 540 aaKnown RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 OR5V1Q9UGF6 321 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 FBXO4Q9UKT5 387 aa6.45□□□□□ -1.38
BEST1-202ENST00000449131 SIRT4Q9Y6E7 314 aaPredicted RBP6.45□□□□□ -1.38
BEST1-202ENST00000449131 ATG12O94817 140 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 FOLR1P15328 257 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 CD46P15529 392 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 IL2RGP31785 369 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 CDAP32320 146 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 HRH1P35367 487 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 CRYBA2P53672 197 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 SMAD4Q13485 552 aaKnown RBP6.44□□□□□ -1.38
BEST1-202ENST00000449131 RBM39Q14498 530 aaKnown RBP6.44□□□□□ -1.38
BEST1-202ENST00000449131 CLINT1Q14677 625 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 ZNF141Q15928 474 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 MAJINQ3KP22 176 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 B3GNTL1Q67FW5 361 aaPredicted RBP6.44□□□□□ -1.38
BEST1-202ENST00000449131 ZNF574Q6ZN55 896 aaPredicted RBP6.44□□□□□ -1.38
BEST1-202ENST00000449131 OR4S1Q8NGB4 309 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 OR9K2Q8NGE7 335 aa6.44□□□□□ -1.38
BEST1-202ENST00000449131 OR1L3Q8NH93 324 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms