RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 CCL11P51671 97 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 PRKXP51817 358 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF121P58317 390 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 SRYQ05066 204 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF57Q68EA5 555 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 DOK3Q7L591 496 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 NRARPQ7Z6K4 114 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 CMTM4Q8IZR5 234 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 OR5D14Q8NGL3 314 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 OR6M1Q8NGM8 313 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 HAVCR1Q96D42 359 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF845Q96IR2 970 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 SLCO5A1Q9H2Y9 848 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 CRLF2Q9HC73 371 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 TMEM38BQ9NVV0 291 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 RBFOX1Q9NWB1 397 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 DLL3Q9NYJ7 618 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 OR5V1Q9UGF6 321 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 CLEC4AQ9UMR7 237 aa9.31□□□□□ -0.92
VIPAS39-203ENST00000448935 MED12Q93074 2177 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 MED13Q9UHV7 2174 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 PHF3Q92576 2039 aaKnown RBP9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 DMDP11532 3685 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 ZFHX2Q9C0A1 2572 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 TRGV5A0A0B4J1U4 118 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 A0A0B4J203 849 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 TRAV17A0A0B4J275 112 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 H3BSH0 61 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 LYRM1O43325 122 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 CPN1P15169 458 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF20P17024 532 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 MADCAM1Q13477 382 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 RAB35Q15286 201 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 PGAP1Q75T13 922 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 COMMD2Q86X83 199 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 MCEMP1Q8IX19 187 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 LRRC18Q8N456 261 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 DNAAF1Q8NEP3 725 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 SYNPRQ8TBG9 265 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 ABHD3Q8WU67 409 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 PHF21AQ96BD5 680 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 PGAM5Q96HS1 289 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 FOXB1Q99853 325 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 C7orf50Q9BRJ6 194 aaKnown RBP9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 C11orf54Q9H0W9 315 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 ZDHHC11Q9H8X9 412 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 BCO1Q9HAY6 547 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 GPR35Q9HC97 309 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 GP6Q9HCN6 339 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 RHBDL2Q9NX52 303 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 ETAA1Q9NY74 926 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 PLEK2Q9NYT0 353 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 TAS2R4Q9NYW5 299 aa9.3□□□□□ -0.92
VIPAS39-203ENST00000448935 A0A0U1RQV5 110 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 LOC100289279A0A1B0GTE1 492 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 LINC00854A0A1B0GVQ3 168 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 FAM240BA0A1B0GVZ2 78 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 PLA2G10O15496 165 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 AVPP01185 164 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 SPNP16150 400 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 CCL1P22362 96 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 HTR2CP28335 458 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 BDKRB2P30411 391 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 OTX1P32242 354 aaPredicted RBP9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 GNALP38405 381 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 DDOSTP39656 456 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 RFX2P48378 723 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 CLDN12P56749 244 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 GALK2Q01415 458 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 CCDC92Q53HC0 331 aaPredicted RBP9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 TMEM69Q5SWH9 247 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 PLET1Q6UQ28 207 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 DRAM2Q6UX65 266 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 ABHD12BQ7Z5M8 362 aaPredicted RBP9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 CDH26Q8IXH8 852 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 CADM3Q8N126 398 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 FDCSPQ8NFU4 85 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 OR8B12Q8NGG6 310 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 SNRNP27Q8WVK2 155 aaKnown RBP9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF775Q96BV0 537 aaPredicted RBP9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 FGGYQ96C11 551 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 SLC25A38Q96DW6 304 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 ZFP3Q96NJ6 502 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 SORCS2Q96PQ0 1159 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 ABHD1Q96SE0 405 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 TMEM138Q9NPI0 162 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 DIABLOQ9NR28 239 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 NPAP1Q9NZP6 1156 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 SLC5A6Q9Y289 635 aa9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 MRPS7Q9Y2R9 242 aaKnown RBP9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 PTPRZ1P23471 2315 aaPredicted RBP9.29□□□□□ -0.92
VIPAS39-203ENST00000448935 LOC390937A0A1W2PQ73 354 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 GABARAPH6UMI1 98 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 RPL36A-HNRNPH2H7BZ11 118 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 M0R135 149 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 TFECO14948 347 aaPredicted RBP9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 EEF1E1O43324 174 aaKnown RBP9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 SGCEO43556 437 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 MTRF1O75570 445 aaKnown RBP9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 ECDO95905 644 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms