RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 OTX1P32242 354 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 ATP6AP1Q15904 470 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 FAM120AOSQ5T036 256 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 FAHD1Q6P587 224 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 DPY19L4Q7Z388 723 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 CPOQ8IVL8 374 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 OR13G1Q8NGZ3 307 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 OR5K1Q8NHB7 308 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 ITLN1Q8WWA0 313 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 RAB1CQ92928 201 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 SLAMF6Q96DU3 332 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 DUS3LQ96G46 650 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 ZNF582Q96NG8 517 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 KCNJ15Q99712 375 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 SHARPINQ9H0F6 387 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 OR51V1Q9H2C8 321 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 MARCH7Q9H992 704 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 PAPOLBQ9NRJ5 636 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 DCAF16Q9NXF7 216 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 IL19Q9UHD0 177 aa10.78□□□□□ -0.68
PRPF40A-203ENST00000448428 B4DSR2 109 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 G3V2T6 193 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 FAM157CP0CG43 387 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 TNFRSF1AP19438 455 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 PAICSP22234 425 aaKnown RBP10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC6A9P48067 706 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 PRKXP51817 358 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 CRISP1P54107 249 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC3A1Q07837 685 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 MALLQ13021 153 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 EIF2B1Q14232 305 aaKnown RBP10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 TAF13Q15543 124 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 CR1LQ2VPA4 569 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 SNAI3Q3KNW1 292 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 DRAM2Q6UX65 266 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 IL17RELQ6ZVW7 336 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 SPATC1Q76KD6 591 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 ASRGL1Q7L266 308 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 AMIGO2Q86SJ2 522 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 ERI1Q8IV48 349 aaKnown RBP10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 TIGD4Q8IY51 512 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF283Q8N7M2 679 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 BHLHE23Q8NDY6 225 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 OR6N2Q8NGY6 317 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 DNAJC9Q8WXX5 260 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 ZMYND19Q96E35 227 aaPredicted RBP10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 TIMD4Q96H15 378 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 OR2V2Q96R30 315 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 INTS14Q96SY0 518 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC30A2Q9BRI3 323 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 COPS4Q9BT78 406 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 ABHD6Q9BV23 337 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC25A19Q9HC21 320 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 LPAR3Q9UBY5 353 aa10.77□□□□□ -0.69
PRPF40A-203ENST00000448428 A0A1B0GWJ7 208 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 MLNRO43193 412 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 MITFO75030 526 aaPredicted RBP10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 SELEP16581 610 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 FASP25445 335 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 DVL1P1P54792 670 aaPredicted RBP10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF92Q03936 586 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 PTGES3Q15185 160 aaKnown RBP10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 SNAPC1Q16533 368 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 KLHL12Q53G59 568 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 PGAP1Q75T13 922 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 PARP8Q8N3A8 854 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 BBS1Q8NFJ9 593 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 OR10AD1Q8NGE0 317 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 OR2AE1Q8NHA4 323 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 LRTOMTQ8WZ04 291 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 PLEKHA8Q96JA3 519 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 AMELYQ99218 206 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF665Q9H7R5 613 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 LPAR2Q9HBW0 351 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 GCM1Q9NP62 436 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 TMEM106BQ9NUM4 274 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 TMEM100Q9NV29 134 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 TVP23BQ9NYZ1 205 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 KIF17Q9P2E2 1029 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 TMEFF2Q9UIK5 374 aaPredicted RBP10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 PPP1R3CQ9UQK1 317 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 N6AMT1Q9Y5N5 214 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 NPTNQ9Y639 398 aa10.76□□□□□ -0.69
PRPF40A-203ENST00000448428 ARHGAP32A7KAX9 2087 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF878C9JN71 531 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 F5H5P2 479 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 PRODHO43272 600 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 SELENOFO60613 162 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 CIB2O75838 187 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 IGHV2-5P01817 119 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 HLA-DPB1P04440 258 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 MSMBP08118 114 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 SBK2P0C263 348 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC2A1P11166 492 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC2A5P22732 501 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC15A1P46059 708 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 GRB2P62993 217 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 GLYATL3Q5SZD4 288 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 CXXC5Q7LFL8 322 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 SHFQ7M4L6 423 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms