RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 ERVK13-1Q9NX77 482 aa12.07□□□□□ -0.48
CTSS-202ENST00000448301 PCDHGB5Q9Y5G0 923 aa12.07□□□□□ -0.48
CTSS-202ENST00000448301 ACOD1A6NK06 481 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 MAGEB4O15481 346 aaPredicted RBP12.06□□□□□ -0.48
CTSS-202ENST00000448301 SRSF10O75494 262 aaKnown RBP12.06□□□□□ -0.48
CTSS-202ENST00000448301 ANXA2P07355 339 aaKnown RBP12.06□□□□□ -0.48
CTSS-202ENST00000448301 OR4A8P0C604 315 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 ZNF250P15622 560 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 ZNF121P58317 390 aaPredicted RBP12.06□□□□□ -0.48
CTSS-202ENST00000448301 SLC35A2P78381 396 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 ST3GAL4Q11206 333 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 EFNB3Q15768 340 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 MSMPQ1L6U9 139 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 ZNF829Q3KNS6 432 aaPredicted RBP12.06□□□□□ -0.48
CTSS-202ENST00000448301 SNAI3Q3KNW1 292 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 ZNF718Q3SXZ3 478 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 RBM48Q5RL73 367 aaKnown RBP12.06□□□□□ -0.48
CTSS-202ENST00000448301 MBNL2Q5VZF2 373 aaKnown RBP12.06□□□□□ -0.48
CTSS-202ENST00000448301 AHSA2Q719I0 299 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 FAM220AQ7Z4H9 259 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 KCTD20Q7Z5Y7 419 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 LHFPL3Q86UP9 236 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 FBXL14Q8N1E6 418 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 SYS1Q8N2H4 156 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 MUC15Q8N387 334 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 YIPF7Q8N8F6 280 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 MRPL24Q96A35 216 aaKnown RBP12.06□□□□□ -0.48
CTSS-202ENST00000448301 OR2J1Q9GZK6 312 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 POFUT1Q9H488 388 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 MOB1AQ9H8S9 216 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 FAM206AQ9NX38 181 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 UBAP1Q9NZ09 502 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 STARD10Q9Y365 291 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 EXOSC1Q9Y3B2 195 aaKnown RBP12.06□□□□□ -0.48
CTSS-202ENST00000448301 TPRKBQ9Y3C4 175 aa12.06□□□□□ -0.48
CTSS-202ENST00000448301 LRBAP50851 2863 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 IGLV3-9A0A075B6K5 115 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 TMEM269A0A1B0GVZ9 245 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 ADRA2AP08913 450 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 TACSTD2P09758 323 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 LIMS3P0CW19 117 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 LIMS4P0CW20 117 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 SLC2A1P11166 492 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 MYL12AP19105 171 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 CRHBPP24387 322 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 SERPINF1P36955 418 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 EVX1P49640 407 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 MMP16P51512 607 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 MALLQ13021 153 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 TP53I3Q53FA7 332 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 SPATA46Q5T0L3 261 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 AGAP6Q5VW22 663 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 LIPNQ5VXI9 398 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 PAMR1Q6UXH9 720 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 DTX2Q86UW9 622 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 ZNF786Q8N393 782 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 STX19Q8N4C7 294 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 OR52H1Q8NGJ2 320 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 SYNPRQ8TBG9 265 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 KLF14Q8TD94 323 aaPredicted RBP12.05□□□□□ -0.48
CTSS-202ENST00000448301 MRPL37Q9BZE1 423 aaKnown RBP12.05□□□□□ -0.48
CTSS-202ENST00000448301 PLK3Q9H4B4 646 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 CBLN4Q9NTU7 201 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 GNG8Q9UK08 70 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 R4GMQ9 66 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 UNC79Q9P2D8 2635 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 ROS1P08922 2347 aa12.05□□□□□ -0.48
CTSS-202ENST00000448301 B9A039 149 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 XRCC2O43543 280 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 CDK1P06493 297 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 SOD3P08294 240 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 ANOS1P23352 680 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 GCH1P30793 250 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 ETV1P50549 477 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 KLF3P57682 345 aaPredicted RBP12.04□□□□□ -0.48
CTSS-202ENST00000448301 OR12D2P58182 307 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 MVKQ03426 396 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 C11orf71Q6IPW1 123 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 FBXW12Q6X9E4 464 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 FAM57BQ71RH2 274 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 IGFBPL1Q8WX77 278 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 MYDGFQ969H8 173 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 PGAM5Q96HS1 289 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 C4orf36Q96KX1 117 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 TRAF4Q9BUZ4 470 aaPredicted RBP12.04□□□□□ -0.48
CTSS-202ENST00000448301 OR10A2Q9H208 303 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 DUSP21Q9H596 190 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 OPA3Q9H6K4 179 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 ACOXLQ9NUZ1 547 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 PAK1IP1Q9NWT1 392 aaPredicted RBP12.04□□□□□ -0.48
CTSS-202ENST00000448301 CHCHD3Q9NX63 227 aaKnown RBP12.04□□□□□ -0.48
CTSS-202ENST00000448301 PTTG3PQ9NZH4 202 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 BLOC1S6Q9UL45 172 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 CAB39Q9Y376 341 aaPredicted RBP12.04□□□□□ -0.48
CTSS-202ENST00000448301 LRRC42Q9Y546 428 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 CENPEQ02224 2701 aa12.04□□□□□ -0.48
CTSS-202ENST00000448301 TMEM129A0AVI4 362 aa12.03□□□□□ -0.48
CTSS-202ENST00000448301 C5orf63A6NC05 138 aa12.03□□□□□ -0.48
CTSS-202ENST00000448301 PTGES3LE9PB15 166 aa12.03□□□□□ -0.48
CTSS-202ENST00000448301 LOC110117498-PIK3R3F6TDL0 507 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms