RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 RHOXF1Q8NHV9 184 aa11.22□□□□□ -0.61
ERGIC3-209ENST00000447986 ADI1Q9BV57 179 aa11.22□□□□□ -0.61
ERGIC3-209ENST00000447986 CYSLTR2Q9NS75 346 aa11.22□□□□□ -0.61
ERGIC3-209ENST00000447986 PCDHGB1Q9Y5G3 927 aa11.22□□□□□ -0.61
ERGIC3-209ENST00000447986 HRNRQ86YZ3 2850 aaPredicted RBP11.22□□□□□ -0.61
ERGIC3-209ENST00000447986 H0YJX3 145 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 TIMM8AO60220 97 aaPredicted RBP11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 ZNF254O75437 659 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 CLPTM1O96005 669 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 ANXA2P07355 339 aaKnown RBP11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 ADRA2AP08913 450 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 OR2T7P0C7T2 308 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 RAC2P15153 192 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 SELEP16581 610 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 HCCSP53701 268 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 CXCR4P61073 352 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 MSMPQ1L6U9 139 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 PRSS57Q6UWY2 283 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 LIAT1Q6ZQX7 453 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 OR52H1Q8NGJ2 320 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 OR2T27Q8NH04 317 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 AMELYQ99218 206 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 MYCBPQ99417 103 aaPredicted RBP11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 PTTG3PQ9NZH4 202 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 IKZF2Q9UKS7 526 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 ITPR2Q14571 2701 aa11.21□□□□□ -0.61
ERGIC3-209ENST00000447986 A6NJY4 79 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 XRCC2O43543 280 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ATP6V1G2O95670 118 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ROS1P08922 2347 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 GABRB1P18505 474 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 MPV17P39210 176 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 CAPGP40121 348 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ALDH3B1P43353 468 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 EFNA4P52798 201 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ACTC1P68032 377 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ACTA1P68133 377 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 NOTCH2Q04721 2471 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 EGR3Q06889 387 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 Q5PR19 223 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ZNF691Q5VV52 312 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ZNF322Q6U7Q0 402 aaPredicted RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 FBXW12Q6X9E4 464 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 MRPL21Q7Z2W9 205 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 NAA40Q86UY6 237 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ZNF679Q8IYX0 411 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 OR10H4Q8NGA5 316 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 NEU4Q8WWR8 484 aaPredicted RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 HAVCR1Q96D42 359 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 CMBLQ96DG6 245 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 RNFT2Q96EX2 444 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 OPA3Q9H6K4 179 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 MYEF2Q9P2K5 600 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 KLHDC2Q9Y2U9 406 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 RRP15Q9Y3B9 282 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 RPL36Q9Y3U8 105 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 LRP12Q9Y561 859 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 N6AMT1Q9Y5N5 214 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 HSPE1-MOB4S4R3N1 261 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ANKRD17O75179 2603 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 TBX1O43435 398 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 KRT8P05787 483 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 KITLGP21583 273 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 DCTDP32321 178 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 RIDAP52758 137 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ADARB1P78563 741 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ROM1Q03395 351 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 PSG7Q13046 419 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 MAD2L1BPQ15013 274 aaPredicted RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ZNF829Q3KNS6 432 aaPredicted RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 ALKBH6Q3KRA9 238 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 PGAP1Q75T13 922 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 C8orf59Q8N0T1 100 aaPredicted RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 SORCS2Q96PQ0 1159 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 OR8B4Q96RC9 309 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 PURGQ9UJV8 347 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 COPS3Q9UNS2 423 aa11.2□□□□□ -0.62
ERGIC3-209ENST00000447986 SPG11Q96JI7 2443 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 C17orf100A8MU93 164 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 SSX4O60224 188 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 APOL3O95236 402 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 CLIC3O95833 236 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 IGHV4-39P01824 125 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 SLC2A1P11166 492 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 NAT2P11245 290 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 CFL1P23528 166 aaKnown RBP11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 ZNF81P51508 661 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 ZNF121P58317 390 aaPredicted RBP11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 PSMA6P60900 246 aaKnown RBP11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 GK2Q14410 553 aaPredicted RBP11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 TIGD6Q17RP2 521 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 PCGF3Q3KNV8 242 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 KLHL22Q53GT1 634 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 USP51Q70EK9 711 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 FAM57BQ71RH2 274 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 NRG4Q8WWG1 115 aa11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 MRPL48Q96GC5 212 aaKnown RBP11.19□□□□□ -0.62
ERGIC3-209ENST00000447986 PGAM5Q96HS1 289 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms