RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 PYCR1P32322 319 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 GATA4P43694 442 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 SRP9P49458 86 aaKnown RBP13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 ZNF154Q13106 437 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 KLF17Q5JT82 389 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 RPL13AP3Q6NVV1 102 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 LYPD4Q6UWN0 246 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 RASSF6Q6ZTQ3 369 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 MUC20Q8N307 709 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 LINC00471Q8N535 108 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 ZDHHC22Q8N966 263 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 CYB561A3Q8NBI2 242 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 OR2AJ1Q8NGZ0 328 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 POP5Q969H6 163 aaKnown RBP13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 DACT3Q96B18 629 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 CDADC1Q9BWV3 514 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 HCAR1Q9BXC0 346 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 DDX28Q9NUL7 540 aaKnown RBP13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 INSIG2Q9Y5U4 225 aa13.29□□□□□ -0.28
SPTLC1P1-201ENST00000447199 TMEM89A2RUT3 159 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 ZNF205O95201 554 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 HLA-DQA2P01906 255 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 HLA-DPB1P04440 258 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 CPT2P23786 658 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 RPS27P42677 84 aaKnown RBP13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 MNAT1P51948 309 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 MAB21L1Q13394 359 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 PCK2Q16822 640 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 LCN8Q6JVE9 175 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 MOGAT3Q86VF5 341 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 LNX2Q8N448 690 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 CELF2-AS1Q8N7Q2 184 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 OR52L1Q8NGH7 329 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 JMJD8Q96S16 334 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 RBM4Q9BWF3 364 aaKnown RBP13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 NMNAT2Q9BZQ4 307 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 MAGIXQ9H6Y5 334 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 TMEM100Q9NV29 134 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 VNN3Q9NY84 501 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 LRCH1Q9Y2L9 728 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 TRRAPQ9Y4A5 3859 aa13.28□□□□□ -0.28
SPTLC1P1-201ENST00000447199 IGHV3-64DA0A0J9YX35 117 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 C5orf63A6NC05 138 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 TRIM77I1YAP6 450 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 M0R135 149 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CFPP27918 469 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CD200P41217 278 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 RAD23AP54725 363 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 TPTEP56180 551 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MXRA7P84157 204 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MS4A2Q01362 244 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PAX8Q06710 450 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PPP1R8Q12972 351 aaKnown RBP13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SNAI3Q3KNW1 292 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ESCO2Q56NI9 601 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 C12orf54Q6X4T0 127 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ARHGAP24Q8N264 748 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 BPIFB2Q8N4F0 458 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SLC37A3Q8NCC5 494 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PROKR2Q8NFJ6 384 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR2T4Q8NH00 348 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 Q8TCH9 128 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 C22orf15Q8WYQ4 148 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SLCO4A1Q96BD0 722 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ZNF799Q96GE5 643 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 TMEM246Q9BRR3 403 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 DGCR6LQ9BY27 220 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 AUP1Q9Y679 476 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 COMMD3-BMI1R4GMX3 469 aa13.27□□□□□ -0.29
SPTLC1P1-201ENST00000447199 TVP23AA6NH52 213 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 B2RBV5 119 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CCNB2O95067 398 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PTBP3O95758 552 aaKnown RBP13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 LCATP04180 440 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ZNF823P16415 610 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 FPR2P25090 351 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MALLQ13021 153 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CRMP1Q14194 572 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MICAQ29983 383 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ZNF404Q494X3 552 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 FAM201AQ5SY85 155 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PGAP1Q75T13 922 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 KLBQ86Z14 1044 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 AQP11Q8NBQ7 271 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR51L1Q8NGJ5 315 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 OR4Q3Q8NH05 313 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ERGIC1Q969X5 290 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SSBP3Q9BWW4 388 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 TSSK6Q9BXA6 273 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MUC13Q9H3R2 512 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 NUP50Q9UKX7 468 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PKD1L1Q8TDX9 2849 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 MGAM2Q2M2H8 2515 aa13.26□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CD300LBA8K4G0 201 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 PPIAL4GP0DN37 164 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 T-ENOLP0DO92 83 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 CD80P33681 288 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 SLC25A1P53007 311 aa13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 UBA52P62987 128 aaKnown RBP13.25□□□□□ -0.29
SPTLC1P1-201ENST00000447199 ACTG1P63261 375 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms