RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 C5orf63A6NC05 138 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 IQCF6A8MYZ5 107 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 ATP5HO75947 161 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 SRD5A1P18405 259 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 TNFRSF1AP19438 455 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 SLC6A9P48067 706 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 PRKXP51817 358 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 CDK5Q00535 292 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 SLC3A1Q07837 685 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 TAF13Q15543 124 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 SNAI3Q3KNW1 292 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 TEX30Q5JUR7 227 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 TMEM236Q5W0B7 351 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 GLCCI1Q86VQ1 547 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 ERI1Q8IV48 349 aaKnown RBP12.47□□□□□ -0.41
USE1-202ENST00000445667 ZNF283Q8N7M2 679 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 OR13G1Q8NGZ3 307 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 SPTSSAQ969W0 71 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 UTP4Q969X6 686 aaKnown RBP12.47□□□□□ -0.41
USE1-202ENST00000445667 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 COPS4Q9BT78 406 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 DDX28Q9NUL7 540 aaKnown RBP12.47□□□□□ -0.41
USE1-202ENST00000445667 HIF1ANQ9NWT6 349 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 N6AMT1Q9Y5N5 214 aa12.47□□□□□ -0.41
USE1-202ENST00000445667 PRR23D1E9PI22 279 aaPredicted RBP12.46□□□□□ -0.41
USE1-202ENST00000445667 SURF4O15260 269 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 MLNRO43193 412 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 DEAF1O75398 565 aaPredicted RBP12.46□□□□□ -0.41
USE1-202ENST00000445667 GLCEO94923 617 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 IGHV2-5P01817 119 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 HLA-DPB1P04440 258 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 MSMBP08118 114 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 SBK2P0C263 348 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 PRR23D2P0DMB1 279 aaPredicted RBP12.46□□□□□ -0.41
USE1-202ENST00000445667 SLC2A1P11166 492 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 HNF1AP20823 631 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 GSTT1P30711 240 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 DAPP51397 102 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 BLVRAP53004 296 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 MALLQ13021 153 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 EIF2B1Q14232 305 aaKnown RBP12.46□□□□□ -0.41
USE1-202ENST00000445667 PLBD1Q6P4A8 553 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 SHQ1Q6PI26 577 aaKnown RBP12.46□□□□□ -0.41
USE1-202ENST00000445667 PGAP1Q75T13 922 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 DPY19L4Q7Z388 723 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 PEG10Q86TG7 708 aaKnown RBP12.46□□□□□ -0.41
USE1-202ENST00000445667 OR6N2Q8NGY6 317 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 OR2AE1Q8NHA4 323 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 ST7LQ8TDW4 575 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 TMEM186Q96B77 213 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 ZMYND19Q96E35 227 aaPredicted RBP12.46□□□□□ -0.41
USE1-202ENST00000445667 KCNJ15Q99712 375 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 GAL3ST1Q99999 423 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 SLC30A2Q9BRI3 323 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 TMEM106BQ9NUM4 274 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 TMEM100Q9NV29 134 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 UBAP1Q9NZ09 502 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 PPP1R3CQ9UQK1 317 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 NPTNQ9Y639 398 aa12.46□□□□□ -0.41
USE1-202ENST00000445667 CUBNO60494 3623 aa12.46□□□□□ -0.42
USE1-202ENST00000445667 F5H5P2 479 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 HMGN1P05114 100 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 SELEP16581 610 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 PAICSP22234 425 aaKnown RBP12.45□□□□□ -0.42
USE1-202ENST00000445667 OTX1P32242 354 aaPredicted RBP12.45□□□□□ -0.42
USE1-202ENST00000445667 ZNF92Q03936 586 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 KLHL12Q53G59 568 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 C1orf146Q5VVC0 180 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 DRAM2Q6UX65 266 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 MRPL21Q7Z2W9 205 aaKnown RBP12.45□□□□□ -0.42
USE1-202ENST00000445667 CPOQ8IVL8 374 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 OR51F2Q8NH61 342 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 OR5K1Q8NHB7 308 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 ZNF420Q8TAQ5 688 aaPredicted RBP12.45□□□□□ -0.42
USE1-202ENST00000445667 RAB39BQ96DA2 213 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 NRBF2Q96F24 287 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 MEGF10Q96KG7 1140 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 INTS14Q96SY0 518 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 AMELYQ99218 206 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 ABHD6Q9BV23 337 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 MMADHCQ9H3L0 296 aaPredicted RBP12.45□□□□□ -0.42
USE1-202ENST00000445667 GCM1Q9NP62 436 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 KIF17Q9P2E2 1029 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 SVEP1Q4LDE5 3571 aa12.45□□□□□ -0.42
USE1-202ENST00000445667 FBN1P35555 2871 aaKnown RBP12.44□□□□□ -0.42
USE1-202ENST00000445667 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 PLPP2O43688 288 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 IGHV2-70P01814 119 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 ANPEPP15144 967 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 CRISP1P54107 249 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 GLYATL3Q5SZD4 288 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 FAHD2BQ6P2I3 314 aaPredicted RBP12.44□□□□□ -0.42
USE1-202ENST00000445667 FAHD1Q6P587 224 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 AMIGO2Q86SJ2 522 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 TIGD4Q8IY51 512 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 BBS1Q8NFJ9 593 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 SPRYD4Q8WW59 207 aaPredicted RBP12.44□□□□□ -0.42
USE1-202ENST00000445667 FAHD2AQ96GK7 314 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 PLEKHA8Q96JA3 519 aa12.44□□□□□ -0.42
USE1-202ENST00000445667 SIGLEC11Q96RL6 698 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms