RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 KRTAP1-3Q8IUG1 177 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 ZNF679Q8IYX0 411 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 MRPL48Q96GC5 212 aaKnown RBP14.87□□□□□ -0.03
LIME1-202ENST00000444951 ZNF799Q96GE5 643 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 C4orf36Q96KX1 117 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 HS3ST6Q96QI5 342 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 INPP5EQ9NRR6 644 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 EIF3KQ9UBQ5 218 aaKnown RBP14.87□□□□□ -0.03
LIME1-202ENST00000444951 POU2F3Q9UKI9 436 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 ATP23Q9Y6H3 246 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 PLAUP00749 431 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 LCATP04180 440 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 ANXA2P07355 339 aaKnown RBP14.86□□□□□ -0.03
LIME1-202ENST00000444951 ACSM4P0C7M7 580 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 PSMB10P40306 273 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 WNT5AP41221 380 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 CHN2P52757 468 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 ROM1Q03395 351 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 OR2G6Q5TZ20 316 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 VHLLQ6RSH7 139 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 KLHL36Q8N4N3 616 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 IL17RDQ8NFM7 739 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 KBTBD8Q8NFY9 601 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 SMR3AQ99954 134 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 YTHDF1Q9BYJ9 559 aaKnown RBP14.86□□□□□ -0.03
LIME1-202ENST00000444951 DUSP21Q9H596 190 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 ISG20L2Q9H9L3 353 aaKnown RBP14.86□□□□□ -0.03
LIME1-202ENST00000444951 ATPIF1Q9UII2 106 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 RNF115Q9Y4L5 304 aa14.86□□□□□ -0.03
LIME1-202ENST00000444951 MYL12BO14950 172 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 ZNF35P13682 527 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 CD53P19397 219 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 NR1H2P55055 460 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 ACTA2P62736 377 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 ACTG2P63267 376 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 CDONQ4KMG0 1287 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 ZNF684Q5T5D7 378 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 TMPRSS11AQ6ZMR5 421 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 FAM57BQ71RH2 274 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 ABHD4Q8TB40 342 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 NEUROG1Q92886 237 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 C4orf45Q96LM5 186 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 ACOXLQ9NUZ1 547 aa14.85□□□□□ -0.03
LIME1-202ENST00000444951 TBX1O43435 398 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 ZNF254O75437 659 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 NGFP01138 241 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 LCKP06239 509 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 TACSTD2P09758 323 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 MAP2K4P45985 399 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 ZNF121P58317 390 aaPredicted RBP14.84□□□□□ -0.03
LIME1-202ENST00000444951 GABARAPL2P60520 117 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 MFGE8Q08431 387 aaPredicted RBP14.84□□□□□ -0.03
LIME1-202ENST00000444951 SNTB2Q13425 540 aaKnown RBP14.84□□□□□ -0.03
LIME1-202ENST00000444951 GFOD2Q3B7J2 385 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 SPATA46Q5T0L3 261 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 LIPNQ5VXI9 398 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 DEGS2Q6QHC5 323 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 ARL9Q6T311 187 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 ZNF101Q8IZC7 436 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 SPRYD4Q8WW59 207 aaPredicted RBP14.84□□□□□ -0.03
LIME1-202ENST00000444951 GATAD2BQ8WXI9 593 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 DCLRE1CQ96SD1 692 aaKnown RBP14.84□□□□□ -0.03
LIME1-202ENST00000444951 DOK1Q99704 481 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 ZNF649Q9BS31 505 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 JAM3Q9BX67 310 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 ERGIC3Q9Y282 383 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 SPEF1Q9Y4P9 236 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 SNX5Q9Y5X3 404 aa14.84□□□□□ -0.03
LIME1-202ENST00000444951 TMEM269A0A1B0GVZ9 245 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 C5orf63A6NC05 138 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 SULT1C4O75897 302 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 TNFAIP8O95379 198 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 MT-ND5P03915 603 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 HTR1AP08908 422 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 ANOS1P23352 680 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 LOXP28300 417 aaPredicted RBP14.83□□□□□ -0.04
LIME1-202ENST00000444951 PSMA6P60900 246 aaKnown RBP14.83□□□□□ -0.04
LIME1-202ENST00000444951 ERVS71-1P61550 626 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 ZNF829Q3KNS6 432 aaPredicted RBP14.83□□□□□ -0.04
LIME1-202ENST00000444951 KRTAP27-1Q3LI81 207 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 DRAM2Q6UX65 266 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 RFPL4BQ6ZWI9 263 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 RHOUQ7L0Q8 258 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 PRSS48Q7RTY5 328 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 KLBQ86Z14 1044 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 OR1J1Q8NGS3 322 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 PGAM5Q96HS1 289 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 MYCBPQ99417 103 aaPredicted RBP14.83□□□□□ -0.04
LIME1-202ENST00000444951 NIPAL2Q9H841 368 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 PTTG3PQ9NZH4 202 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 FZR1Q9UM11 496 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 STARD10Q9Y365 291 aa14.83□□□□□ -0.04
LIME1-202ENST00000444951 CAB39Q9Y376 341 aaPredicted RBP14.83□□□□□ -0.04
LIME1-202ENST00000444951 ARID1AO14497 2285 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 SHISA9B4DS77 424 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 LOC110117498-PIK3R3F6TDL0 507 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 GPRIN2O60269 458 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 SMPD2O60906 423 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 PNPP00491 289 aa14.82□□□□□ -0.04
LIME1-202ENST00000444951 APOC1P02654 83 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms