RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 INTS14Q96SY0 518 aa15.8■□□□□ 0.12
CCDC188-202ENST00000444532 OR51V1Q9H2C8 321 aa15.8■□□□□ 0.12
CCDC188-202ENST00000444532 IL19Q9UHD0 177 aa15.8■□□□□ 0.12
CCDC188-202ENST00000444532 CDC42EP3Q9UKI2 254 aa15.8■□□□□ 0.12
CCDC188-202ENST00000444532 MALRD1Q5VYJ5 2156 aa15.8■□□□□ 0.12
CCDC188-202ENST00000444532 IQCF6A8MYZ5 107 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 ZNF878C9JN71 531 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 PRODHO43272 600 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 SLC15A1P46059 708 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 CDH15P55291 814 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 ESRRGP62508 458 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 TAF13Q15543 124 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 PLBD1Q6P4A8 553 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 RHOUQ7L0Q8 258 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 SHFQ7M4L6 423 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 ERI1Q8IV48 349 aaKnown RBP15.79■□□□□ 0.12
CCDC188-202ENST00000444532 OR5AS1Q8N127 324 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 RAB1CQ92928 201 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 KCNJ15Q99712 375 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 COPS4Q9BT78 406 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 CENPMQ9NSP4 180 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 LPAR3Q9UBY5 353 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 CACNG2Q9Y698 323 aa15.79■□□□□ 0.12
CCDC188-202ENST00000444532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCDC188-202ENST00000444532 B4DSR2 109 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 SLC6A9P48067 706 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 GRB2P62993 217 aaKnown RBP15.78■□□□□ 0.12
CCDC188-202ENST00000444532 MVKQ03426 396 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 EIF2B1Q14232 305 aaKnown RBP15.78■□□□□ 0.12
CCDC188-202ENST00000444532 GK2Q14410 553 aaPredicted RBP15.78■□□□□ 0.12
CCDC188-202ENST00000444532 SLC35D3Q5M8T2 416 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 TMEM236Q5W0B7 351 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 DPY19L4Q7Z388 723 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 PEG10Q86TG7 708 aaKnown RBP15.78■□□□□ 0.12
CCDC188-202ENST00000444532 ZDHHC13Q8IUH4 622 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 CPOQ8IVL8 374 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 TIGD4Q8IY51 512 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 OR6N2Q8NGY6 317 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 TOR3AQ9H497 397 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 NARFLQ9H6Q4 476 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 KRT84Q9NSB2 600 aa15.78■□□□□ 0.12
CCDC188-202ENST00000444532 DYSFO75923 2080 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 WNT9BO14905 357 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 LMO4P61968 165 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 PTGES3Q15185 160 aaKnown RBP15.77■□□□□ 0.12
CCDC188-202ENST00000444532 SNAPC1Q16533 368 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 SPRNQ5BIV9 151 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 PGAP1Q75T13 922 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 AMIGO2Q86SJ2 522 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 PRIMA1Q86XR5 153 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 LRTOMTQ8WZ04 291 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 ZMYND19Q96E35 227 aaPredicted RBP15.77■□□□□ 0.12
CCDC188-202ENST00000444532 SLC30A2Q9BRI3 323 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 ABHD6Q9BV23 337 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 BEX2Q9BXY8 128 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 SHARPINQ9H0F6 387 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 TMEM100Q9NV29 134 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 TREM2Q9NZC2 230 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 WIPI2Q9Y4P8 454 aa15.77■□□□□ 0.12
CCDC188-202ENST00000444532 ABCA2Q9BZC7 2435 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 A0A1B0GWJ7 208 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 APOC1P02654 83 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 IGFBP5P24593 272 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 PRKXP51817 358 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 KLHL12Q53G59 568 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 AVPI1Q5T686 147 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 KDM4DQ6B0I6 523 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 CXXC5Q7LFL8 322 aaKnown RBP15.76■□□□□ 0.11
CCDC188-202ENST00000444532 MRPL21Q7Z2W9 205 aaKnown RBP15.76■□□□□ 0.11
CCDC188-202ENST00000444532 ZNF283Q8N7M2 679 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 RNF133Q8WVZ7 376 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 ITLN1Q8WWA0 313 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 CENPNQ96H22 339 aaPredicted RBP15.76■□□□□ 0.11
CCDC188-202ENST00000444532 OR2V2Q96R30 315 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 PRRG3Q9BZD7 231 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 GABARAPL1Q9H0R8 117 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 SP140LQ9H930 580 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 TVP23BQ9NYZ1 205 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 ENOPH1Q9UHY7 261 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 PPP1R3CQ9UQK1 317 aa15.76■□□□□ 0.11
CCDC188-202ENST00000444532 IFNL4K9M1U5 179 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 ANPEPP15144 967 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 SLC2A5P22732 501 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 SRP9P49458 86 aaKnown RBP15.75■□□□□ 0.11
CCDC188-202ENST00000444532 DVL1P1P54792 670 aaPredicted RBP15.75■□□□□ 0.11
CCDC188-202ENST00000444532 SNAI3Q3KNW1 292 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 ZNF454Q8N9F8 522 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 BHLHE23Q8NDY6 225 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 OTOSQ8NHW6 89 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 RAB39BQ96DA2 213 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 REPIN1Q9BWE0 567 aaKnown RBP15.75■□□□□ 0.11
CCDC188-202ENST00000444532 OPA3Q9H6K4 179 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 ZNF665Q9H7R5 613 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 TMEM106BQ9NUM4 274 aa15.75■□□□□ 0.11
CCDC188-202ENST00000444532 MLNRO43193 412 aa15.74■□□□□ 0.11
CCDC188-202ENST00000444532 XRCC2O43543 280 aa15.74■□□□□ 0.11
CCDC188-202ENST00000444532 FAM157CP0CG43 387 aa15.74■□□□□ 0.11
CCDC188-202ENST00000444532 HNF1AP20823 631 aa15.74■□□□□ 0.11
CCDC188-202ENST00000444532 PCMT1P22061 227 aa15.74■□□□□ 0.11
CCDC188-202ENST00000444532 HSD11B1P28845 292 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms