RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ZNF556Q9HAH1 456 aa15.91■□□□□ 0.14
ATPAF2-201ENST00000444058 PPP1R3CQ9UQK1 317 aa15.91■□□□□ 0.14
ATPAF2-201ENST00000444058 ZNF593O00488 134 aaPredicted RBP15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 FKBP6O75344 327 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 GYPBP06028 91 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 ANXA8P13928 327 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 SRP9P49458 86 aaKnown RBP15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 CBX1P83916 185 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 TMEM155Q4W5P6 130 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 RHOUQ7L0Q8 258 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 DCXRQ7Z4W1 244 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 NAA40Q86UY6 237 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 OR5AS1Q8N127 324 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 ATG16L2Q8NAA4 619 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 ZNF511Q8NB15 262 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 ITLN1Q8WWA0 313 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 NRBF2Q96F24 287 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 GAL3ST1Q99999 423 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 CADM1Q9BY67 442 aaKnown RBP15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 GCM1Q9NP62 436 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 TMEM100Q9NV29 134 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 CUBNO60494 3623 aa15.9■□□□□ 0.14
ATPAF2-201ENST00000444058 TANC2Q9HCD6 1990 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 PHF1O43189 567 aaPredicted RBP15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 ATP5HO75947 161 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 IGHV2-70P01814 119 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 HMGN1P05114 100 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 SPARCP09486 303 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 OSMP13725 252 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 PAICSP22234 425 aaKnown RBP15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 RPS27P42677 84 aaKnown RBP15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 SLC15A1P46059 708 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 LYPD4Q6UWN0 246 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 PGAP1Q75T13 922 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 SPICQ8N5J4 248 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 OR6K6Q8NGW6 343 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 ST7LQ8TDW4 575 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 DNAJC9Q8WXX5 260 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 SLAMF6Q96DU3 332 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 SIGLEC11Q96RL6 698 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 KCNJ15Q99712 375 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 SLC22A4Q9H015 551 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 MMADHCQ9H3L0 296 aaPredicted RBP15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 MARCH7Q9H992 704 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 LPAR2Q9HBW0 351 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 G6PC2Q9NQR9 355 aa15.89■□□□□ 0.13
ATPAF2-201ENST00000444058 ISPDA4D126 451 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 ZNF878C9JN71 531 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 PLPP2O43688 288 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 FSTL3O95633 263 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 PNPP00491 289 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 CLUP10909 449 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 PSKH1P11801 424 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 GATA3P23771 443 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 CPT2P23786 658 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 SRP14P37108 136 aaKnown RBP15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 SLC6A9P48067 706 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 GINS1Q14691 196 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 ZNF181Q2M3W8 571 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 LRRC28Q86X40 367 aaPredicted RBP15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 CELF2-AS1Q8N7Q2 184 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 SLCO4A1Q96BD0 722 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 MEGF10Q96KG7 1140 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 COPS4Q9BT78 406 aa15.88■□□□□ 0.13
ATPAF2-201ENST00000444058 PPIAL4EA0A075B759 164 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 PPIAL4CA0A0B4J2A2 164 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 A0A0G2JMP0 313 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 A0A0X1KG70 313 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 RNF212BA8MTL3 300 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 PPIAL4DF5H284 164 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 TMEM178BH3BS89 294 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 J3QLI3 93 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 MLNRO43193 412 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 GLCEO94923 617 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 PPIAL4FP0DN26 164 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 GATA4P43694 442 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 MMP16P51512 607 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 BTG1P62324 171 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 GRB2P62993 217 aaKnown RBP15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 CDK5Q00535 292 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 SCGB2A2Q13296 93 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 TAF13Q15543 124 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 SHQ1Q6PI26 577 aaKnown RBP15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 MRPL21Q7Z2W9 205 aaKnown RBP15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 KLHL36Q8N4N3 616 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 RFLNBQ8N5W9 214 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 IQCF1Q8N6M8 205 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 BHLHE23Q8NDY6 225 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 OR4M2Q8NGB6 313 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 OR10AD1Q8NGE0 317 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 ERGIC1Q969X5 290 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 INTS14Q96SY0 518 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 REPIN1Q9BWE0 567 aaKnown RBP15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 TEX12Q9BXU0 123 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 TOR3AQ9H497 397 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 OPA3Q9H6K4 179 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 NTN4Q9HB63 628 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 DCAF16Q9NXF7 216 aa15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 NOP16Q9Y3C1 178 aaKnown RBP15.87■□□□□ 0.13
ATPAF2-201ENST00000444058 FAM183AA6NL82 134 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms