RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TSSK2Q96PF2 358 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 SLC22A12Q96S37 553 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 LHX9Q9NQ69 397 aa4.53□□□□□ -1.68
HERC1-201ENST00000443617 H7C1C5 153 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 ADAMTS4O75173 837 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 MOSPD3O75425 235 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 KLF8O95600 359 aaPredicted RBP4.53□□□□□ -1.69
HERC1-201ENST00000443617 COX5BP10606 129 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 HLA-GP17693 338 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 PI3P19957 117 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 LCN6P62502 163 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 FZD2Q14332 565 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 ALG10Q5BKT4 473 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 FCRL6Q6DN72 434 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 OR5R1Q8NH85 324 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 EMG1Q92979 244 aaKnown RBP4.53□□□□□ -1.69
HERC1-201ENST00000443617 RSPRY1Q96DX4 576 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 B9D1Q9UPM9 204 aa4.53□□□□□ -1.69
HERC1-201ENST00000443617 CDRT15L2A8MXV6 281 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 CDKN2AP42771 156 aaKnown RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 RNF151Q2KHN1 245 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GPR157Q5UAW9 335 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ADIPOR2Q86V24 386 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ZNF595Q8IYB9 648 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ZNF248Q8NDW4 579 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 RSC1A1Q92681 617 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 MS4A6EQ96DS6 147 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GALNT14Q96FL9 552 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 C4orf45Q96LM5 186 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GPER1Q99527 375 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GPR87Q9BY21 358 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.52□□□□□ -1.69
HERC1-201ENST00000443617 ZNF346Q9UL40 294 aaKnown RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 DOT1LQ8TEK3 1739 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 A0A087WV48 116 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SNRPCP09234 159 aaKnown RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 SLC2A1P11166 492 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 CXCR1P25024 350 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 LCN10Q6JVE6 187 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 MCHR2Q969V1 340 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ARSGQ96EG1 525 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 BSCL2Q96G97 398 aaPredicted RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 NKX3-1Q99801 234 aaPredicted RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 ICAM5Q9UMF0 924 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SNRNP200O75643 2136 aaKnown RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 FHITP49789 147 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GPR137CQ8N3F9 429 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 PRSS35Q8N3Z0 413 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 OR10AD1Q8NGE0 317 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 RAB39BQ96DA2 213 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 MYOFQ9NZM1 2061 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 MED19A0JLT2 244 aaPredicted RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 ST6GAL1P15907 406 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SUCLG1P53597 346 aaKnown RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 TAF1CQ15572 869 aaPredicted RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 DBX2Q6ZNG2 339 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 NUDT9Q9BW91 350 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 CENPMQ9NSP4 180 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 MARCH5Q9NX47 278 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 OR5AC2Q9NZP5 309 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 DOCK11Q5JSL3 2073 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ABCA3Q99758 1704 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TGM5O43548 720 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 NUBP1P53384 320 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GLO1Q04760 184 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 EGR3Q06889 387 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ISXQ2M1V0 245 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TMEM25Q86YD3 366 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TM7SF3Q9NS93 570 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 IL17BQ9UHF5 180 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HHLA2Q9UM44 414 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 H0YIZ8 118 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 H2BFMP0C1H6 154 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SLC26A5P58743 744 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 DLK1P80370 383 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 NPAS4Q8IUM7 802 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SCGB1C1Q8TD33 95 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 ROBO4Q8WZ75 1007 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 LRFN1Q9P244 771 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GPR75O95800 540 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 LRG1P02750 347 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 FOLR1P15328 257 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 IL2RGP31785 369 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HSD17B7P56937 341 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HOGA1Q86XE5 327 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SULF2Q8IWU5 870 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 NDUFAF3Q9BU61 184 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 TLCD2A6NGC4 264 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 E5RGE8 158 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 GLRA1P23415 457 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 SLC8B1Q6J4K2 584 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 KLK13Q9UKR3 277 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 NSG2Q9Y328 171 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 IGLON5A6NGN9 336 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 PPIHO43447 177 aaKnown RBP4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H2BKO60814 126 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 CSTAP01040 98 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H2BJP06899 126 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H2BOP23527 126 aa4.52□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H2BBP33778 126 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms