RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 NAT2P11245 290 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 PSKH1P11801 424 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 DAOP14920 347 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 SLC25A16P16260 332 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 TNFSF4P23510 183 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 OPRL1P41146 370 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 CX3CR1P49238 355 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 MMP15P51511 669 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 PRKXP51817 358 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 SNRPGP62308 76 aaKnown RBP9.26□□□□□ -0.93
HDAC6-211ENST00000443563 ALKBH6Q3KRA9 238 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 SLC25A30Q5SVS4 291 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 DNM1P46Q6ZS02 220 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 PGAP1Q75T13 922 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 SPATC1Q76KD6 591 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 KRT77Q7Z794 578 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 ZCCHC24Q8N2G6 241 aaKnown RBP9.26□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF525Q8N782 197 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF540Q8NDQ6 660 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 UBASH3BQ8TF42 649 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 CMBLQ96DG6 245 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 Q96MT0 163 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 MBOAT4Q96T53 435 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 PIMREGQ9BSJ6 248 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 MROQ9BYG7 248 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 EGLN1Q9GZT9 426 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 DECR2Q9NUI1 292 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 CLN6Q9NWW5 311 aa9.26□□□□□ -0.93
HDAC6-211ENST00000443563 PURGQ9UJV8 347 aaKnown RBP9.26□□□□□ -0.93
HDAC6-211ENST00000443563 E9PQ18 207 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 H0YHG0 523 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 CASQ2O14958 399 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-211ENST00000443563 SLC16A6O15403 523 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 TPD52L2O43399 206 aaKnown RBP9.25□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF254O75437 659 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 ANXA2P07355 339 aaKnown RBP9.25□□□□□ -0.93
HDAC6-211ENST00000443563 ADH4P08319 380 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 SBK2P0C263 348 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 ALOX5APP20292 161 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 CFL1P23528 166 aaKnown RBP9.25□□□□□ -0.93
HDAC6-211ENST00000443563 DCTDP32321 178 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 ATP6V1E1P36543 226 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 MRPS11P82912 194 aaKnown RBP9.25□□□□□ -0.93
HDAC6-211ENST00000443563 TNK1Q13470 666 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 OCLNQ16625 522 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 TTC23Q5W5X9 447 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 MRPL21Q7Z2W9 205 aaKnown RBP9.25□□□□□ -0.93
HDAC6-211ENST00000443563 BCDIN3DQ7Z5W3 292 aaKnown RBP9.25□□□□□ -0.93
HDAC6-211ENST00000443563 NAA40Q86UY6 237 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 SLC35F2Q8IXU6 374 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF786Q8N393 782 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 GALNT4Q8N4A0 578 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 OR52H1Q8NGJ2 320 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 C10orf105Q8TEF2 133 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 RDH5Q92781 318 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 C18orf12Q96KH6 178 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF582Q96NG8 517 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-211ENST00000443563 APOL4Q9BPW4 351 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 POFUT1Q9H488 388 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 FAM118AQ9NWS6 357 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 NOP16Q9Y3C1 178 aaKnown RBP9.25□□□□□ -0.93
HDAC6-211ENST00000443563 RTTNQ86VV8 2226 aa9.25□□□□□ -0.93
HDAC6-211ENST00000443563 ACOD1A6NK06 481 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 IQCF6A8MYZ5 107 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 TBX1O43435 398 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 LY6HO94772 140 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 OR2T7P0C7T2 308 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 RIDAP52758 137 aaKnown RBP9.24□□□□□ -0.93
HDAC6-211ENST00000443563 CCL8P80075 99 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 ROM1Q03395 351 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 SLC34A1Q06495 639 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 CDK5R2Q13319 367 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 GK2Q14410 553 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-211ENST00000443563 HLXQ14774 488 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-211ENST00000443563 CARTPTQ16568 116 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 TIGD6Q17RP2 521 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 LRRC36Q1X8D7 754 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 OGFRL1Q5TC84 451 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-211ENST00000443563 LPCAT4Q643R3 524 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 LRRN1Q6UXK5 716 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 USP51Q70EK9 711 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF679Q8IYX0 411 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 OR8G5Q8NG78 346 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 OR51G2Q8NGK0 314 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 OR13G1Q8NGZ3 307 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 OR2T27Q8NH04 317 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 PGAM5Q96HS1 289 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 AMELYQ99218 206 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 MYCBPQ99417 103 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-211ENST00000443563 REG4Q9BYZ8 158 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 SLC22A4Q9H015 551 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 OR10A2Q9H208 303 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 SAP30LQ9HAJ7 183 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 ADGRL4Q9HBW9 690 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 DLL4Q9NR61 685 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 DNAJC27Q9NZQ0 273 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF391Q9UJN7 358 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 LRP12Q9Y561 859 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 PCDHGB1Q9Y5G3 927 aa9.24□□□□□ -0.93
HDAC6-211ENST00000443563 IGHV4-30-2A0A087WSY4 118 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms