RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 HSD11B1P28845 292 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 NAA10P41227 235 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 SLC25A30Q5SVS4 291 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 DEGS2Q6QHC5 323 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 BIVMQ86UB2 503 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 NAA40Q86UY6 237 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 THEM6Q8WUY1 208 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 RDH5Q92781 318 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 RFKQ969G6 155 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 CNN2Q99439 309 aaKnown RBP12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 OPA3Q9H6K4 179 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 IMPAD1Q9NX62 359 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 PTTG3PQ9NZH4 202 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 LAMP5Q9UJQ1 280 aa12.82□□□□□ -0.36
CSNK1E-210ENST00000442216 IQCF6A8MYZ5 107 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 RNF223E7ERA6 249 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 M0R129 80 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 PHYHO14832 338 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 XRCC2O43543 280 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 CD55P08174 381 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 H2BFMP0C1H6 154 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 HTR1FP30939 366 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 PRKXP51817 358 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 SNRPGP62308 76 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 POU4F2Q12837 409 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 CDK5R2Q13319 367 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 GK2Q14410 553 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 HLXQ14774 488 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 ZIK1Q3SY52 487 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 MEDAGQ5VYS4 303 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 BCDIN3DQ7Z5W3 292 aaKnown RBP12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 CIARTQ8N365 385 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 PACRGLQ8N7B6 248 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 ZNF283Q8N7M2 679 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 FAM81AQ8TBF8 368 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 ASB17Q8WXJ9 295 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 AMELYQ99218 206 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 DECR2Q9NUI1 292 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 ACANP16112 2415 aa12.81□□□□□ -0.36
CSNK1E-210ENST00000442216 ZSCAN5BA6NJL1 495 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 ANKRD65E5RJM6 399 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 MPZL2O60487 215 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 NCR1O76036 304 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 IGHV1-46P01743 117 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 HPXP02790 462 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 ACHEP22303 614 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 DCTDP32321 178 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 MAGEB1P43366 347 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 CX3CR1P49238 355 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 CCL8P80075 99 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 LOXL1Q08397 574 aaPredicted RBP12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 RCN1Q15293 331 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 OCLNQ16625 522 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 SNAI3Q3KNW1 292 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 PGAP1Q75T13 922 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 SPATC1Q76KD6 591 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 PRSS45Q7RTY3 260 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 OR8G5Q8NG78 346 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 OR52H1Q8NGJ2 320 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 ZNF582Q96NG8 517 aaPredicted RBP12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 MBOAT4Q96T53 435 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 REPIN1Q9BWE0 567 aaKnown RBP12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 EGLN1Q9GZT9 426 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 DCLRE1BQ9H816 532 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 CHODLQ9H9P2 273 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 ADGRL4Q9HBW9 690 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 SMPD3Q9NY59 655 aaPredicted RBP12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 GMPPBQ9Y5P6 360 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 DYSFO75923 2080 aa12.8□□□□□ -0.36
CSNK1E-210ENST00000442216 A0A096LNT2 108 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 A0A1B0GWJ7 208 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 ACOD1A6NK06 481 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 SNTNA6NMZ2 147 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 SLC16A6O15403 523 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 SPRY3O43610 288 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 ZNF254O75437 659 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 MRPL3P09001 348 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 SBK2P0C263 348 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 TNFSF4P23510 183 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 CRYBB2P43320 205 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 NR4A2P43354 598 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 TMEM33P57088 247 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 ROM1Q03395 351 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 RIN1Q13671 783 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 TRIP10Q15642 601 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 OR2T2Q6IF00 324 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 USP51Q70EK9 711 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 MRPL21Q7Z2W9 205 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 KRT77Q7Z794 578 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 SLC35F2Q8IXU6 374 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 OR13G1Q8NGZ3 307 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 GTF3AQ92664 365 aaKnown RBP12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 SPSB4Q96A44 273 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 MROQ9BYG7 248 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 SAP30LQ9HAJ7 183 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 MSL2Q9HCI7 577 aa12.79□□□□□ -0.36
CSNK1E-210ENST00000442216 FAM118AQ9NWS6 357 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms