RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ESRRGP62508 458 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 EIF2B1Q14232 305 aaKnown RBP20.05■□□□□ 0.8
VARS-217ENST00000440048 TAF13Q15543 124 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 HFEQ30201 348 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 DPY19L4Q7Z388 723 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 TIGD4Q8IY51 512 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 OR2Z1Q8NG97 314 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 NARFLQ9H6Q4 476 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 KRT84Q9NSB2 600 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 TVP23BQ9NYZ1 205 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 TREM2Q9NZC2 230 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 DYSFO75923 2080 aa20.05■□□□□ 0.8
VARS-217ENST00000440048 LOC100289279A0A1B0GTE1 492 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 ZNF878C9JN71 531 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 EBAG9O00559 213 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 PRODHO43272 600 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 TNFSF4P23510 183 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 SLC6A9P48067 706 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 PRKXP51817 358 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 MALLQ13021 153 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 GK2Q14410 553 aaPredicted RBP20.04■□□□□ 0.8
VARS-217ENST00000440048 PTGES3Q15185 160 aaKnown RBP20.04■□□□□ 0.8
VARS-217ENST00000440048 SNAPC1Q16533 368 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 KLHL12Q53G59 568 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 KDM4DQ6B0I6 523 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 DRAM2Q6UX65 266 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 SPATC1Q76KD6 591 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 BBS1Q8NFJ9 593 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 OR8G5Q8NG78 346 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 CLDND2Q8NHS1 167 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 KCNJ15Q99712 375 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 SEMA6AQ9H2E6 1030 aa20.04■□□□□ 0.8
VARS-217ENST00000440048 IQCF6A8MYZ5 107 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 ANOS1P23352 680 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 PRSS12P56730 875 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 ACTR3P61158 418 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 KPNB1Q14974 876 aaKnown RBP20.03■□□□□ 0.8
VARS-217ENST00000440048 SNAI3Q3KNW1 292 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 AVPI1Q5T686 147 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 FAM166AQ6J272 317 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 CXXC5Q7LFL8 322 aaKnown RBP20.03■□□□□ 0.8
VARS-217ENST00000440048 SHFQ7M4L6 423 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 PYDC1Q8WXC3 89 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 CCL17Q92583 94 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 CENPNQ96H22 339 aaPredicted RBP20.03■□□□□ 0.8
VARS-217ENST00000440048 ZNF582Q96NG8 517 aaPredicted RBP20.03■□□□□ 0.8
VARS-217ENST00000440048 ABHD6Q9BV23 337 aa20.03■□□□□ 0.8
VARS-217ENST00000440048 C5orf63A6NC05 138 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 CLDN25C9JDP6 229 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 SELENOFO60613 162 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 LMX1BO60663 402 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 TGFAP01135 160 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 SELEP16581 610 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 SLC2A5P22732 501 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 MVKQ03426 396 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 SLC35D3Q5M8T2 416 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 BHLHE23Q8NDY6 225 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 OR13G1Q8NGZ3 307 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 ITLN1Q8WWA0 313 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 C1orf159Q96HA4 380 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 AMELYQ99218 206 aa20.02■□□□□ 0.8
VARS-217ENST00000440048 MXRA5Q9NR99 2828 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 SLC2A1P11166 492 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 EPHA2P29317 976 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 RPS7P62081 194 aaKnown RBP20.01■□□□□ 0.79
VARS-217ENST00000440048 GRB2P62993 217 aaKnown RBP20.01■□□□□ 0.79
VARS-217ENST00000440048 HNRNPA0Q13151 305 aaKnown RBP20.01■□□□□ 0.79
VARS-217ENST00000440048 PGAP1Q75T13 922 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 RNF133Q8WVZ7 376 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 SLC30A2Q9BRI3 323 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 TMEM160Q9NX00 188 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 IL19Q9UHD0 177 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 TMEFF2Q9UIK5 374 aaPredicted RBP20.01■□□□□ 0.79
VARS-217ENST00000440048 KCNS2Q9ULS6 477 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 OAZ3Q9UMX2 235 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 WIPI2Q9Y4P8 454 aa20.01■□□□□ 0.79
VARS-217ENST00000440048 ZAR1LA6NP61 321 aa20■□□□□ 0.79
VARS-217ENST00000440048 PRKYO43930 277 aa20■□□□□ 0.79
VARS-217ENST00000440048 TNFRSF1AP19438 455 aa20■□□□□ 0.79
VARS-217ENST00000440048 SLC15A1P46059 708 aa20■□□□□ 0.79
VARS-217ENST00000440048 CDH15P55291 814 aa20■□□□□ 0.79
VARS-217ENST00000440048 LMO4P61968 165 aa20■□□□□ 0.79
VARS-217ENST00000440048 APOFQ13790 326 aa20■□□□□ 0.79
VARS-217ENST00000440048 MRPL21Q7Z2W9 205 aaKnown RBP20■□□□□ 0.79
VARS-217ENST00000440048 PRIMA1Q86XR5 153 aa20■□□□□ 0.79
VARS-217ENST00000440048 ZNF283Q8N7M2 679 aa20■□□□□ 0.79
VARS-217ENST00000440048 LINC01356Q8N9X3 169 aa20■□□□□ 0.79
VARS-217ENST00000440048 OR10AD1Q8NGE0 317 aa20■□□□□ 0.79
VARS-217ENST00000440048 OR2AE1Q8NHA4 323 aa20■□□□□ 0.79
VARS-217ENST00000440048 OTOSQ8NHW6 89 aa20■□□□□ 0.79
VARS-217ENST00000440048 RAB1CQ92928 201 aa20■□□□□ 0.79
VARS-217ENST00000440048 TIMD4Q96H15 378 aa20■□□□□ 0.79
VARS-217ENST00000440048 OR2V2Q96R30 315 aa20■□□□□ 0.79
VARS-217ENST00000440048 CIB1Q99828 191 aa20■□□□□ 0.79
VARS-217ENST00000440048 TOR3AQ9H497 397 aa20■□□□□ 0.79
VARS-217ENST00000440048 N6AMT1Q9Y5N5 214 aa20■□□□□ 0.79
VARS-217ENST00000440048 SAC3D1A6NKF1 404 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 H0YL77 283 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 MLNRO43193 412 aa19.99■□□□□ 0.79
VARS-217ENST00000440048 IGFBP5P24593 272 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms