RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 FASP25445 335 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 PRSS12P56730 875 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 SLC3A1Q07837 685 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 EIF2B1Q14232 305 aaKnown RBP20.36■□□□□ 0.85
CPNE1-217ENST00000439669 PCK2Q16822 640 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 TMEM236Q5W0B7 351 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 FAHD1Q6P587 224 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 SPATC1Q76KD6 591 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 OR8G5Q8NG78 346 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 RAB1CQ92928 201 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 BEX2Q9BXY8 128 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 SLC25A19Q9HC21 320 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 LPAR3Q9UBY5 353 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 ABCA2Q9BZC7 2435 aa20.36■□□□□ 0.85
CPNE1-217ENST00000439669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.35■□□□□ 0.859e-9■■■□□ 15.2
CPNE1-217ENST00000439669 IQCF6A8MYZ5 107 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 ZNF878C9JN71 531 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 SELEP16581 610 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 TNFRSF1AP19438 455 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 PRKXP51817 358 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 GK2Q14410 553 aaPredicted RBP20.35■□□□□ 0.85
CPNE1-217ENST00000439669 KLHL12Q53G59 568 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 CCDC121Q6ZUS5 278 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 MRPL21Q7Z2W9 205 aaKnown RBP20.35■□□□□ 0.85
CPNE1-217ENST00000439669 DPY19L4Q7Z388 723 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 OR10AD1Q8NGE0 317 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 ST7LQ8TDW4 575 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 ITLN1Q8WWA0 313 aa20.35■□□□□ 0.85
CPNE1-217ENST00000439669 ZMYND19Q96E35 227 aaPredicted RBP20.35■□□□□ 0.85
CPNE1-217ENST00000439669 ISPDA4D126 451 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 B4DSR2 109 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 G3V2T6 193 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 FCGR1AP12314 374 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 DAPP51397 102 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 SNAI3Q3KNW1 292 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 DRAM2Q6UX65 266 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 AMIGO2Q86SJ2 522 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 PEG10Q86TG7 708 aaKnown RBP20.34■□□□□ 0.85
CPNE1-217ENST00000439669 CPOQ8IVL8 374 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 OR13G1Q8NGZ3 307 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 C1orf159Q96HA4 380 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 OR2V2Q96R30 315 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 KCNJ15Q99712 375 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 LPAR2Q9HBW0 351 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 N6AMT1Q9Y5N5 214 aa20.34■□□□□ 0.85
CPNE1-217ENST00000439669 FAM157AC9JC47 383 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 OTX1P32242 354 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-217ENST00000439669 SLC15A1P46059 708 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 CRISP1P54107 249 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 RPS7P62081 194 aaKnown RBP20.33■□□□□ 0.85
CPNE1-217ENST00000439669 HNRNPA0Q13151 305 aaKnown RBP20.33■□□□□ 0.85
CPNE1-217ENST00000439669 FAM120AOSQ5T036 256 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 IL17RELQ6ZVW7 336 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 PGAP1Q75T13 922 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 ASRGL1Q7L266 308 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 PARP8Q8N3A8 854 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 ZNF283Q8N7M2 679 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 DUS3LQ96G46 650 aaKnown RBP20.33■□□□□ 0.85
CPNE1-217ENST00000439669 KRT84Q9NSB2 600 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 TVP23BQ9NYZ1 205 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 IL19Q9UHD0 177 aa20.33■□□□□ 0.85
CPNE1-217ENST00000439669 JMJD1CQ15652 2540 aa20.33■□□□□ 0.84
CPNE1-217ENST00000439669 TANC2Q9HCD6 1990 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 KIAA1324LA8MWY0 1029 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-217ENST00000439669 PRODHO43272 600 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 SLC2A1P11166 492 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 HNF1AP20823 631 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 LMO4P61968 165 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 GRB2P62993 217 aaKnown RBP20.32■□□□□ 0.84
CPNE1-217ENST00000439669 SNAPC1Q16533 368 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 CR1LQ2VPA4 569 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 ZNF771Q7L3S4 317 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-217ENST00000439669 CXXC5Q7LFL8 322 aaKnown RBP20.32■□□□□ 0.84
CPNE1-217ENST00000439669 SHFQ7M4L6 423 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 ZDHHC13Q8IUH4 622 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 TIGD4Q8IY51 512 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 LRTOMTQ8WZ04 291 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 RAB39BQ96DA2 213 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 GAL3ST1Q99999 423 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 SLC30A2Q9BRI3 323 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 ABHD6Q9BV23 337 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 ZNF665Q9H7R5 613 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 MARCH7Q9H992 704 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 TMEM106BQ9NUM4 274 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 DCAF16Q9NXF7 216 aa20.32■□□□□ 0.84
CPNE1-217ENST00000439669 SELENOFO60613 162 aa20.31■□□□□ 0.84
CPNE1-217ENST00000439669 FAM157CP0CG43 387 aa20.31■□□□□ 0.84
CPNE1-217ENST00000439669 HSD11B1P28845 292 aa20.31■□□□□ 0.84
CPNE1-217ENST00000439669 GLCCI1Q86VQ1 547 aa20.31■□□□□ 0.84
CPNE1-217ENST00000439669 BBS1Q8NFJ9 593 aa20.31■□□□□ 0.84
CPNE1-217ENST00000439669 OR2AE1Q8NHA4 323 aa20.31■□□□□ 0.84
CPNE1-217ENST00000439669 SPRYD4Q8WW59 207 aaPredicted RBP20.31■□□□□ 0.84
CPNE1-217ENST00000439669 TMEM100Q9NV29 134 aa20.31■□□□□ 0.84
CPNE1-217ENST00000439669 PPP1R3CQ9UQK1 317 aa20.31■□□□□ 0.84
CPNE1-217ENST00000439669 C5orf63A6NC05 138 aa20.3■□□□□ 0.84
CPNE1-217ENST00000439669 H0YL77 283 aa20.3■□□□□ 0.84
CPNE1-217ENST00000439669 MLNRO43193 412 aa20.3■□□□□ 0.84
CPNE1-217ENST00000439669 MITFO75030 526 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-217ENST00000439669 MSMBP08118 114 aa20.3■□□□□ 0.84
CPNE1-217ENST00000439669 ANOS1P23352 680 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms