RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 BDKRB2P30411 391 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 MMP16P51512 607 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 QRFPP83859 136 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 NKPD1Q17RQ9 610 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 ZNF813Q6ZN06 617 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 MOB3CQ70IA8 216 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 TRAPPC6BQ86SZ2 158 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 MISPQ8IVT2 679 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 PAQR4Q8N4S7 273 aaPredicted RBP14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 OR52H1Q8NGJ2 320 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 TMEM234Q8WY98 164 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 FAM46BQ96A09 425 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 DUSP23Q9BVJ7 150 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 B3GNT4Q9C0J1 378 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 FAM206AQ9NX38 181 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 NPIPA1Q9UND3 350 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 RNF222A6NCQ9 220 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 DUX1O43812 170 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 H2BFMP0C1H6 154 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 SP9P0CG40 484 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 CXADRP78310 365 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 UNC119Q13432 240 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 PPP1R1AQ13522 171 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 CDNFQ49AH0 187 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 C3orf33Q6P1S2 294 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 OR10K1Q8NGX5 313 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 MFSD8Q8NHS3 518 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 NKD1Q969G9 470 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 NPAS1Q99742 590 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 PDCD10Q9BUL8 212 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 CST11Q9H112 138 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 TMEM185BQ9H7F4 350 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 COMMD9Q9P000 198 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 CYB5R1Q9UHQ9 305 aa14.6□□□□□ -0.07
CLCNKA-203ENST00000439316 ASCC3Q8N3C0 2202 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 ANKUB1A6NFN9 424 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 CCSO14618 274 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 SMAD9O15198 467 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 SIGLEC6O43699 453 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 BPNT1O95861 308 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 LIPCP11150 499 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 CD96P40200 585 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 TRIM61Q5EBN2 209 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 FAM74A1Q5RGS3 127 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 FAM122CQ6P4D5 195 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 H1FNTQ75WM6 255 aaPredicted RBP14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 CD163Q86VB7 1156 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 PLXDC1Q8IUK5 500 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 CARFQ8N187 725 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 MITD1Q8WV92 249 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 ST8SIA1Q92185 356 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 FGGYQ96C11 551 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 CMBLQ96DG6 245 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 PHYHIPLQ96FC7 376 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 VRK1Q99986 396 aaPredicted RBP14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 MKL2Q9ULH7 1088 aa14.59□□□□□ -0.07
CLCNKA-203ENST00000439316 CACNA1HO95180 2353 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 C9orf170A2RU37 121 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 TTRP02766 147 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 DLSTP36957 453 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 ARL4DP49703 201 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 LUMP51884 338 aaPredicted RBP14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 OR7A5Q15622 319 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 FAHD2BQ6P2I3 314 aaPredicted RBP14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 LANCL3Q6ZV70 420 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 OR52N4Q8NGI2 321 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 PPP1R1CQ8WVI7 109 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 FAHD2AQ96GK7 314 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 ARL5BQ96KC2 179 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 UQCC2Q9BRT2 126 aa14.58□□□□□ -0.07
CLCNKA-203ENST00000439316 AVPR2P30518 371 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 ATP1B3P54709 279 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 HSF1Q00613 529 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 POU3F1Q03052 451 aaPredicted RBP14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 TAF13Q15543 124 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 ZNF528Q3MIS6 628 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 CFAP77Q6ZQR2 320 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 ACOT7LQ6ZUV0 252 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 D2HGDHQ8N465 521 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 SLC22A24Q8N4F4 322 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 GVQW1Q8N7I0 195 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 OR1M1Q8NGA1 313 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 NUDCD2Q8WVJ2 157 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 ZNF75AQ96N20 296 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 NUDT16L1Q9BRJ7 211 aaKnown RBP14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 CHST11Q9NPF2 352 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 CENPMQ9NSP4 180 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 FBLN5Q9UBX5 448 aa14.58□□□□□ -0.08
CLCNKA-203ENST00000439316 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 LY6G6EA0A0G2JKS1 128 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 A0A1B0GX78 115 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 EIF1AYO14602 144 aaKnown RBP14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 SCGNO76038 276 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 STK17BO94768 372 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 WDPCPO95876 746 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 VSIG8P0DPA2 414 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 FOLR1P15328 257 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 GPR85P60893 370 aa14.57□□□□□ -0.08
CLCNKA-203ENST00000439316 LRRC37A5PQ49AS3 106 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms