RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 GPR160Q9UJ42 338 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 SLC22A23A1A5C7 686 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 H7C2Y5 167 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 TNFSF12O43508 249 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 ATG12O94817 140 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 FAM157BP0CG42 384 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 ATF1P18846 271 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 CD79BP40259 229 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 SSPNQ14714 243 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 GPR157Q5UAW9 335 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 ATG4DQ86TL0 474 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-205ENST00000439160 CCDC71Q8IV32 467 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-205ENST00000439160 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 FAM173AQ9BQD7 235 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 ZFP64Q9NPA5 681 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 EXOSC3Q9NQT5 275 aaKnown RBP11.04□□□□□ -0.64
TCOF1-205ENST00000439160 GNG12Q9UBI6 72 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 KLK11Q9UBX7 282 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 A0A0G2JMZ2 1700 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 SLC22A20A6NK97 555 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 IL2RAP01589 272 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 SERPINA7P05543 415 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 ZNF136P52737 540 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 FXNQ16595 210 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 ANKRD16Q6P6B7 361 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 FAM109AQ8N4B1 249 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 OR5M9Q8NGP3 310 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 CPNE4Q96A23 557 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-205ENST00000439160 ZNF501Q96CX3 271 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-205ENST00000439160 SLC25A21Q9BQT8 299 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-205ENST00000439160 WFDC6Q9BQY6 131 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 ASF1BQ9NVP2 202 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 TCFL5Q9UL49 500 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 ANK1P16157 1881 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 FAM221AA4D161 298 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 OIP5O43482 229 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 PTHLHP12272 177 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 GLCCI1Q86VQ1 547 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 FJX1Q86VR8 437 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 DOK1Q99704 481 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 FOXB1Q99853 325 aa11.04□□□□□ -0.64
TCOF1-205ENST00000439160 RALGAPA2Q2PPJ7 1873 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 BHLHE40O14503 412 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 PLPP2O43688 288 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 NRASP01111 189 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 GK2Q14410 553 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-205ENST00000439160 ELFN2Q5R3F8 820 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 CLVS2Q5SYC1 327 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 LAIR1Q6GTX8 287 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 SPINK14Q6IE38 97 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 OGFOD3Q6PK18 319 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 CT55Q8WUE5 264 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 MAFIPQ8WZ33 124 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 SPTAN1Q13813 2472 aaKnown RBP11.03□□□□□ -0.64
TCOF1-205ENST00000439160 HSPB2A8KAH6 182 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 PLPP3O14495 311 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 HS3ST1O14792 307 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 EFEMP2O95967 443 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 IGKV1D-16P01601 117 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 TGM1P22735 817 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 OPRM1P35372 400 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 FOXC1Q12948 553 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 HSPB2Q16082 182 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 PHLDA2Q53GA4 152 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 RHOUQ7L0Q8 258 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 REEP6Q96HR9 211 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 OCSTAMPQ9BR26 566 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 SARGQ9BW04 601 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 BCO1Q9HAY6 547 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 OR2M5A3KFT3 312 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 SDCBPO00560 298 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-205ENST00000439160 SSX5O60225 188 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 ZNF728P0DKX0 622 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 DCTDP32321 178 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 ERVK-16P61578 105 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 AADACL3Q5VUY0 350 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 CCDC190Q86UF4 302 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 EMG1Q92979 244 aaKnown RBP11.03□□□□□ -0.64
TCOF1-205ENST00000439160 FLVCR2Q9UPI3 526 aa11.03□□□□□ -0.64
TCOF1-205ENST00000439160 PDCD11Q14690 1871 aaKnown RBP11.03□□□□□ -0.64
TCOF1-205ENST00000439160 TRAV1-2A0A0B4J238 106 aa11.02□□□□□ -0.64
TCOF1-205ENST00000439160 ALOX5APP20292 161 aa11.02□□□□□ -0.64
TCOF1-205ENST00000439160 SKP2Q13309 424 aa11.02□□□□□ -0.64
TCOF1-205ENST00000439160 ALKAL2Q6UX46 152 aa11.02□□□□□ -0.64
TCOF1-205ENST00000439160 DND1Q8IYX4 353 aaKnown RBP11.02□□□□□ -0.64
TCOF1-205ENST00000439160 C4orf45Q96LM5 186 aa11.02□□□□□ -0.64
TCOF1-205ENST00000439160 NGBQ9NPG2 151 aa11.02□□□□□ -0.64
TCOF1-205ENST00000439160 PLEKHB1Q9UF11 243 aaPredicted RBP11.02□□□□□ -0.64
TCOF1-205ENST00000439160 EXOGQ9Y2C4 368 aaKnown RBP11.02□□□□□ -0.64
TCOF1-205ENST00000439160 ARHGEF17Q96PE2 2063 aaPredicted RBP11.02□□□□□ -0.64
TCOF1-205ENST00000439160 TRGV5A0A0B4J1U4 118 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 OR6C65A6NJZ3 312 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 MKRN2OSH3BPM6 223 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 PRRG2O14669 202 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 CD3DP04234 171 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 STARD6P59095 220 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
TCOF1-205ENST00000439160 EDDM3AQ14507 147 aa11.02□□□□□ -0.65
TCOF1-205ENST00000439160 PAN3Q58A45 887 aaKnown RBP11.02□□□□□ -0.65
TCOF1-205ENST00000439160 GCNT2Q8N0V5 402 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms