RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ACHEP22303 614 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 NAA10P41227 235 aaPredicted RBP11.25□□□□□ -0.61
LINC00399-201ENST00000439008 RGS6P49758 472 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 APOFQ13790 326 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 EIF2B1Q14232 305 aaKnown RBP11.25□□□□□ -0.61
LINC00399-201ENST00000439008 SNAPC1Q16533 368 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 PCGF3Q3KNV8 242 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 UNQ6126/PRO20091Q6UXV3 157 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 PRSS45Q7RTY3 260 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 OR2AE1Q8NHA4 323 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 RNF133Q8WVZ7 376 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 MSI2Q96DH6 328 aaKnown RBP11.25□□□□□ -0.61
LINC00399-201ENST00000439008 CHODLQ9H9P2 273 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 ZNF319Q9P2F9 582 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 GPR160Q9UJ42 338 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 CUBNO60494 3623 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 IGHV1-69-2A0A0G2JMI3 117 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 E9PQ18 207 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 J3QW42 95 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 MLNRO43193 412 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 PRODHO43272 600 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 CD55P08174 381 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 PAICSP22234 425 aaKnown RBP11.24□□□□□ -0.61
LINC00399-201ENST00000439008 TUBG1P23258 451 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 IGFBP5P24593 272 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 OPRL1P41146 370 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 CRYBB2P43320 205 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 TPTEP56180 551 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 RIPPLY3P57055 190 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 MRPS11P82912 194 aaKnown RBP11.24□□□□□ -0.61
LINC00399-201ENST00000439008 ZNF92Q03936 586 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 MOGQ16653 247 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 GLYATL3Q5SZD4 288 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 C6orf52Q5T4I8 152 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 AVPI1Q5T686 147 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 AADACL4Q5VUY2 407 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 TCEANCQ8N8B7 351 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 BHLHE23Q8NDY6 225 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 OTOSQ8NHW6 89 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 UBE2FQ969M7 185 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 IL4I1Q96RQ9 567 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 TEAD3Q99594 435 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 KCNJ15Q99712 375 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 COPS4Q9BT78 406 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 NARFLQ9H6Q4 476 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 TUBG2Q9NRH3 451 aa11.24□□□□□ -0.61
LINC00399-201ENST00000439008 IGHV3-64DA0A0J9YX35 117 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 A0A1B0GWJ7 208 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 PLSCR5A0PG75 271 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 IQCF6A8MYZ5 107 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 ZNF878C9JN71 531 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 TLX2O43763 284 aaPredicted RBP11.23□□□□□ -0.61
LINC00399-201ENST00000439008 ALPLP05186 524 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 MRPL3P09001 348 aaKnown RBP11.23□□□□□ -0.61
LINC00399-201ENST00000439008 SELEP16581 610 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 ZNF16P17020 682 aaPredicted RBP11.23□□□□□ -0.61
LINC00399-201ENST00000439008 SLC6A9P48067 706 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 BLVRAP53004 296 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 LMO4P61968 165 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 FAM209AQ5JX71 171 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 RFLNBQ8N5W9 214 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 OR8G5Q8NG78 346 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 OR2Z1Q8NG97 314 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 OR10AD1Q8NGE0 317 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 CLDND2Q8NHS1 167 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 ITLN1Q8WWA0 313 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 PLEKHA8Q96JA3 519 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 SLC30A2Q9BRI3 323 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 GABARAPL3Q9BY60 117 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 SAP30LQ9HAJ7 183 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 S100A14Q9HCY8 104 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 YAE1D1Q9NRH1 226 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 DECR2Q9NUI1 292 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 ZDHHC8Q9ULC8 765 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 COPS3Q9UNS2 423 aa11.23□□□□□ -0.61
LINC00399-201ENST00000439008 ANKRD65E5RJM6 399 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 EI24O14681 340 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 PPIHO43447 177 aaKnown RBP11.22□□□□□ -0.61
LINC00399-201ENST00000439008 MT-ND5P03915 603 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 HLA-DPB1P04440 258 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 ALOX5APP20292 161 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 LIPAP38571 399 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 GPR6P46095 362 aaPredicted RBP11.22□□□□□ -0.61
LINC00399-201ENST00000439008 CX3CR1P49238 355 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 TMEM33P57088 247 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 TNFAIP6P98066 277 aaPredicted RBP11.22□□□□□ -0.61
LINC00399-201ENST00000439008 HOXA4Q00056 320 aaPredicted RBP11.22□□□□□ -0.61
LINC00399-201ENST00000439008 MVKQ03426 396 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 SLC35D3Q5M8T2 416 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 ZFP1Q6P2D0 407 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 DRAM2Q6UX65 266 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 ZNF540Q8NDQ6 660 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 OR5L1Q8NGL2 311 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 TMEM163Q8TC26 289 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 SPTSSAQ969W0 71 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 ELMOD3Q96FG2 381 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 COG8Q96MW5 612 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 SLC29A1Q99808 456 aa11.22□□□□□ -0.61
LINC00399-201ENST00000439008 REPIN1Q9BWE0 567 aaKnown RBP11.22□□□□□ -0.61
LINC00399-201ENST00000439008 RIBC2Q9H4K1 309 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms