RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CHST11Q9NPF2 352 aa12.35□□□□□ -0.43
PTCHD3-201ENST00000438700 CENPMQ9NSP4 180 aa12.35□□□□□ -0.43
PTCHD3-201ENST00000438700 MYEF2Q9P2K5 600 aaKnown RBP12.35□□□□□ -0.43
PTCHD3-201ENST00000438700 CGGBP1Q9UFW8 167 aaPredicted RBP12.35□□□□□ -0.43
PTCHD3-201ENST00000438700 PFDN2Q9UHV9 154 aa12.35□□□□□ -0.43
PTCHD3-201ENST00000438700 LOC101059948A0A1B0GTJ6 334 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 GGT3PA6NGU5 568 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 CREBL2O60519 120 aaPredicted RBP12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 OR2A4O95047 310 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 ZNF35P13682 527 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 DAP3P51398 398 aaKnown RBP12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 MRPS10P82664 201 aaKnown RBP12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 Q0VFX4 171 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 SSPNQ14714 243 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 RAB11BQ15907 218 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 PLPPR5Q32ZL2 321 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 FAM74A1Q5RGS3 127 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 ZNF626Q68DY1 528 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 BOLLQ8N9W6 283 aaKnown RBP12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 OR2M3Q8NG83 312 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 OR2A7Q96R45 310 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 COL25A1Q9BXS0 654 aaPredicted RBP12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 TRAV18A0A075B6X5 111 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 DCDC2BA2VCK2 349 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 A6NIZ1 184 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 KRBOX1C9JBD0 128 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 LMX1BO60663 402 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 PRAF2O60831 178 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 RP2O75695 350 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 RLN2P04090 185 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 BIDP55957 195 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 MLF1P58340 268 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 RAP1BP61224 184 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 RAP1AP62834 184 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 ANKRD16Q6P6B7 361 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 PIP4P1Q86T03 277 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 SPICQ8N5J4 248 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 TMEM156Q8N614 296 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 OR1J4Q8NGS1 313 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 OR13C3Q8NGS6 347 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 SCARB1Q8WTV0 552 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 MRPS24Q96EL2 167 aaKnown RBP12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 SLC25A44Q96H78 314 aaPredicted RBP12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 CKLFQ9UBR5 152 aa12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 PHF3Q92576 2039 aaKnown RBP12.34□□□□□ -0.43
PTCHD3-201ENST00000438700 LOC107986453A0A1B0GWG9 222 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 NAP1L6A6NFF2 107 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 TUBAL3A6NHL2 446 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 LIPT2A6NK58 231 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 SLC17A2O00624 439 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 CD2P06729 351 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 CCL3P10147 92 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 DLX5P56178 289 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 SPOCK1Q08629 439 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 TCF15Q12870 199 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 MYBPHQ13203 477 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 GLYATL3Q5SZD4 288 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 ZNF660Q6AZW8 331 aaPredicted RBP12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 WDSUB1Q8N9V3 476 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 ST7LQ8TDW4 575 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 P4HTMQ9NXG6 502 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 OPN4Q9UHM6 478 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 R4GMQ9 66 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 TMEM272A0A1B0GTI8 110 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 TMEM269A0A1B0GVZ9 245 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 A0A1W2PNR3 127 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 DNASE2O00115 360 aaPredicted RBP12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 ETV2O00321 342 aaPredicted RBP12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 SMAD9O15198 467 aaKnown RBP12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 NDUFA2O43678 99 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 RBBP9O75884 186 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 TNFSF15O95150 251 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 HPP00738 406 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 DLSTP36957 453 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 RAP2BP61225 183 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 ELFN2Q5R3F8 820 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 OLFML2AQ68BL7 652 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 DEFB124Q8NES8 71 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 OR4K17Q8NGC6 315 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 OR10Z1Q8NGY1 313 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 POC1BQ8TC44 478 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 MRGPRX4Q96LA9 322 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 ATG5Q9H1Y0 275 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 SAV1Q9H4B6 383 aaPredicted RBP12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 SERINC1Q9NRX5 453 aa12.33□□□□□ -0.44
PTCHD3-201ENST00000438700 LOC100289279A0A1B0GTE1 492 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 OR6C65A6NJZ3 312 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 GOSR2O14653 212 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 CPN1P15169 458 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 MNDAP41218 407 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 ZP4Q12836 540 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 ZNF468Q5VIY5 522 aaPredicted RBP12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 DNM1P34Q6PK57 102 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 GSG1LQ6UXU4 331 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 LINC00518Q8N0U6 118 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 OR4C16Q8NGL9 310 aa12.32□□□□□ -0.44
PTCHD3-201ENST00000438700 OR8S1Q8NH09 359 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms