RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SOX7Q9BT81 388 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 OR51V1Q9H2C8 321 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 NARFLQ9H6Q4 476 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 SLC25A19Q9HC21 320 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 CENPMQ9NSP4 180 aa20.98■□□□□ 0.95
RAPGEF1-206ENST00000438647 MALRD1Q5VYJ5 2156 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 IQCF6A8MYZ5 107 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 G3V2T6 193 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 PRODHO43272 600 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 SLC15A1P46059 708 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 CDH15P55291 814 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 PLBD1Q6P4A8 553 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 Q6ZR03 302 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 SHFQ7M4L6 423 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 PEG10Q86TG7 708 aaKnown RBP20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 OR6N2Q8NGY6 317 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 KCNJ15Q99712 375 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 BEX2Q9BXY8 128 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 SHARPINQ9H0F6 387 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 CACNG2Q9Y698 323 aa20.97■□□□□ 0.95
RAPGEF1-206ENST00000438647 B4DSR2 109 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 PSKH1P11801 424 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 DAPP51397 102 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 CRISP1P54107 249 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 GRB2P62993 217 aaKnown RBP20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 MVKQ03426 396 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 GK2Q14410 553 aaPredicted RBP20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 PGAP1Q75T13 922 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 ASRGL1Q7L266 308 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 DPY19L4Q7Z388 723 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 NAA40Q86UY6 237 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 ZDHHC13Q8IUH4 622 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 ST7LQ8TDW4 575 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 PRRG3Q9BZD7 231 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 TOR3AQ9H497 397 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 MARCH7Q9H992 704 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 WIPI2Q9Y4P8 454 aa20.96■□□□□ 0.95
RAPGEF1-206ENST00000438647 HNF1AP20823 631 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 IGFBP5P24593 272 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 ESRRGP62508 458 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 EIF2B1Q14232 305 aaKnown RBP20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 KLHL12Q53G59 568 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 SLC35D3Q5M8T2 416 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 AVPI1Q5T686 147 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 MRPL21Q7Z2W9 205 aaKnown RBP20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 RAB39BQ96DA2 213 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 OR2V2Q96R30 315 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 KRT84Q9NSB2 600 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 ENOPH1Q9UHY7 261 aa20.95■□□□□ 0.94
RAPGEF1-206ENST00000438647 ABCA2Q9BZC7 2435 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 WNT9BO14905 357 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 APOC1P02654 83 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 PCMT1P22061 227 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 SNAPC1Q16533 368 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 TMEM236Q5W0B7 351 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 RHOUQ7L0Q8 258 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 CPOQ8IVL8 374 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 TIGD4Q8IY51 512 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 BHLHE23Q8NDY6 225 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 ZMYND19Q96E35 227 aaPredicted RBP20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 SLC30A2Q9BRI3 323 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 OPA3Q9H6K4 179 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 TREM2Q9NZC2 230 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 SVEP1Q4LDE5 3571 aa20.94■□□□□ 0.94
RAPGEF1-206ENST00000438647 IFNA2P01563 188 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 ANPEPP15144 967 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 HSD11B1P28845 292 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 PRKXP51817 358 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 RPS7P62081 194 aaKnown RBP20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 CXXC5Q7LFL8 322 aaKnown RBP20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 PRIMA1Q86XR5 153 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 ZNF283Q8N7M2 679 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 RNF133Q8WVZ7 376 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 ITLN1Q8WWA0 313 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 ABHD6Q9BV23 337 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 GABARAPL1Q9H0R8 117 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 SP140LQ9H930 580 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 TMEM106BQ9NUM4 274 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 TMEM100Q9NV29 134 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 TVP23BQ9NYZ1 205 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 PPP1R3CQ9UQK1 317 aa20.93■□□□□ 0.94
RAPGEF1-206ENST00000438647 IFNL4K9M1U5 179 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 FAM157CP0CG43 387 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 SRP9P49458 86 aaKnown RBP20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 DVL1P1P54792 670 aaPredicted RBP20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 LMO4P61968 165 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 PTGES3Q15185 160 aaKnown RBP20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 SNAI3Q3KNW1 292 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 SPRNQ5BIV9 151 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 FAM120AOSQ5T036 256 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 SPATC1Q76KD6 591 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 AMIGO2Q86SJ2 522 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 GLCCI1Q86VQ1 547 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 ZNF454Q8N9F8 522 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 OR10AD1Q8NGE0 317 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 SPRYD4Q8WW59 207 aaPredicted RBP20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 LRTOMTQ8WZ04 291 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 SLC22A4Q9H015 551 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 ZNF665Q9H7R5 613 aa20.92■□□□□ 0.94
RAPGEF1-206ENST00000438647 NOP16Q9Y3C1 178 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms