RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-208	ENST00000436630	RNF166	Q96A37	237 aa	Predicted RBP	11.65	□□□□□ -0.54
RPE-208	ENST00000436630	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.65	□□□□□ -0.54
RPE-208	ENST00000436630	PGAM5	Q96HS1	289 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	KCNS3	Q9BQ31	491 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	BCL7B	Q9BQE9	202 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	C1QTNF5	Q9BXJ0	243 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	PBOV1	Q9GZY1	135 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	G6PC2	Q9NQR9	355 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	TUBG2	Q9NRH3	451 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	TBCCD1	Q9NVR7	557 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	EIF3K	Q9UBQ5	218 aa	Known RBP	11.65	□□□□□ -0.54
RPE-208	ENST00000436630	GTF2A1L	Q9UNN4	478 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	ZNF281	Q9Y2X9	895 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	GRIP1	Q9Y3R0	1128 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	DOPEY1	Q5JWR5	2465 aa		11.65	□□□□□ -0.54
RPE-208	ENST00000436630	LOC100509620	A0A075B734	347 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630		A0A1W2PR80	420 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	OR4C45	A6NMZ5	311 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	XRCC2	O43543	280 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	PNP	P00491	289 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	HLA-DPB1	P04440	258 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	DBH	P09172	617 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	CECR9	P0C854	216 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	EPX	P11678	715 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	CD36	P16671	472 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	ZNF12	P17014	697 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	ACHE	P22303	614 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	PTAFR	P25105	342 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	LIPA	P38571	399 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	GTF2A1	P52655	376 aa	Predicted RBP	11.64	□□□□□ -0.55
RPE-208	ENST00000436630	NANOS3	P60323	173 aa	Known RBP	11.64	□□□□□ -0.55
RPE-208	ENST00000436630	SLC3A1	Q07837	685 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	SSX1	Q16384	188 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	TMEM108	Q6UXF1	575 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	COLCA1	Q6ZS62	124 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	FAM57B	Q71RH2	274 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	PRSS45	Q7RTY3	260 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	PRSS35	Q8N3Z0	413 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	ZNF676	Q8N7Q3	588 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	ZFP41	Q8N8Y5	198 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	OR5L1	Q8NGL2	311 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	YIPF6	Q96EC8	236 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	PGLYRP3	Q96LB9	341 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	FRRS1L	Q9P0K9	344 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	STUB1	Q9UNE7	303 aa		11.64	□□□□□ -0.55
RPE-208	ENST00000436630	IGHV1-18	A0A0C4DH31	117 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630		H3BSA7	217 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	ZFPL1	O95159	310 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	LCAT	P04180	440 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	MAPK3	P27361	379 aa	Predicted RBP	11.63	□□□□□ -0.55
RPE-208	ENST00000436630	TGFBR2	P37173	567 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	KIR3DL2	P43630	455 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	MALL	Q13021	153 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	DOC2B	Q14184	412 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.63	□□□□□ -0.55
RPE-208	ENST00000436630	SEZ6L2	Q6UXD5	910 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	PAMR1	Q6UXH9	720 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	GDPGP1	Q6ZNW5	385 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	SATL1	Q86VE3	508 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	OR8B12	Q8NGG6	310 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.63	□□□□□ -0.55
RPE-208	ENST00000436630	GPR148	Q8TDV2	347 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	SLC7A6	Q92536	515 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	PHYHIP	Q92561	330 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
RPE-208	ENST00000436630	GHSR	Q92847	366 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	MS4A3	Q96HJ5	214 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	DACH2	Q96NX9	599 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	BCL2L14	Q9BZR8	327 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	SLC24A3	Q9HC58	644 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	HHLA2	Q9UM44	414 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	SPEF1	Q9Y4P9	236 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.63	□□□□□ -0.55
RPE-208	ENST00000436630	HEATR1	Q9H583	2144 aa	Known RBP	11.63	□□□□□ -0.55
RPE-208	ENST00000436630	RTTN	Q86VV8	2226 aa		11.63	□□□□□ -0.55
RPE-208	ENST00000436630	FASN	P49327	2511 aa	Known RBP	11.62	□□□□□ -0.55
RPE-208	ENST00000436630	PNMA8C	A0A1B0GUJ8	204 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630		A0A1B0GVI7	797 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	TUBAL3	A6NHL2	446 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	DHRS7C	A6NNS2	312 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	ZNF701	M0R085	212 aa	Predicted RBP	11.62	□□□□□ -0.55
RPE-208	ENST00000436630		M0R1B8	84 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	GATB	O75879	557 aa	Known RBP	11.62	□□□□□ -0.55
RPE-208	ENST00000436630	RGS9	O75916	674 aa	Predicted RBP	11.62	□□□□□ -0.55
RPE-208	ENST00000436630	AGFG2	O95081	481 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	CRYAA	P02489	173 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	TTR	P02766	147 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	CELA3B	P08861	270 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	CCL1	P22362	96 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	CCNO	P22674	350 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	ZNF83	P51522	516 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	NAAA	Q02083	359 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	CD200R1L	Q6Q8B3	271 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	DOK3	Q7L591	496 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	ANKRD13B	Q86YJ7	626 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	WFDC8	Q8IUA0	241 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	RAB2B	Q8WUD1	216 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	TMIGD2	Q96BF3	282 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	PDCD1LG2	Q9BQ51	273 aa		11.62	□□□□□ -0.55
RPE-208	ENST00000436630	FUNDC2	Q9BWH2	189 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms