RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 NPIPB13A6NJU9 1138 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 FAM25EA8MYX2 175 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 KRBOX1C9JBD0 128 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 NPIPB4C9JG80 1138 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 SLC2A1P11166 492 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 CDAP32320 146 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 CD96P40200 585 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 FOXK1P85037 733 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 FGL1Q08830 312 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 MFAP5Q13361 173 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 COL19A1Q14993 1142 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 RHBDD2Q6NTF9 364 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 WDR74Q6RFH5 385 aaPredicted RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 SLC25A42Q86VD7 318 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 OR5D14Q8NGL3 314 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 ST8SIA2Q92186 375 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 ST8SIA4Q92187 359 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 SELENOIQ9C0D9 397 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 SHARPINQ9H0F6 387 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 ZNF768Q9H5H4 540 aaKnown RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 ALKBH4Q9NXW9 302 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 SLC2A8Q9NY64 477 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 GPN3Q9UHW5 284 aaPredicted RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 RPH3AQ9Y2J0 694 aaPredicted RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 PHF3Q92576 2039 aaKnown RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 TPD52L2O43399 206 aaKnown RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 STK17BO94768 372 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 BPNT1O95861 308 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 HPP00738 406 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 DCNP07585 359 aaKnown RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 MGMTP16455 207 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 RAB3AP20336 220 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 ZBTB25P24278 435 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 LAP3P28838 519 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 AGTR1P30556 359 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 ZNF41P51814 821 aaPredicted RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 PRKXP51817 358 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 CAPZA1P52907 286 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 ATP1B3P54709 279 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 SUMO3P55854 103 aaPredicted RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 IL13RA1P78552 427 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 NKAIN1Q4KMZ8 207 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 PHF19Q5T6S3 580 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 FAM69BQ5VUD6 431 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 CARD17Q5XLA6 110 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 AWAT2Q6E213 333 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 C11orf87Q6NUJ2 197 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 RHOUQ7L0Q8 258 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 OVCH2Q7RTZ1 564 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 COMMD2Q86X83 199 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 ANGPTL5Q86XS5 388 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 KMT5CQ86Y97 462 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 ZBTB44Q8NCP5 570 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 PPP1R1CQ8WVI7 109 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 SOX7Q9BT81 388 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 MRPL13Q9BYD1 178 aaKnown RBP10.49□□□□□ -0.73
CD44-209ENST00000433892 IFT46Q9NQC8 304 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 COMMD9Q9P000 198 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 PPP4R1LQ9P1A2 415 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 SRPK3Q9UPE1 567 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 SLC5A6Q9Y289 635 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 POLR1DQ9Y2S0 133 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 KCNK7Q9Y2U2 307 aa10.49□□□□□ -0.73
CD44-209ENST00000433892 A0A0D9SG52 128 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 OR2AT4A6NND4 320 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 D6RAR5 112 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 MBTPS2O43462 519 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 ABOP16442 354 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 ATF4P18848 351 aaPredicted RBP10.48□□□□□ -0.73
CD44-209ENST00000433892 VAMP1P23763 118 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 AVPR2P30518 371 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 ZNF93P35789 620 aaPredicted RBP10.48□□□□□ -0.73
CD44-209ENST00000433892 CLRN1P58418 232 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 RALGAPA1Q6GYQ0 2036 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 JMJD6Q6NYC1 403 aaPredicted RBP10.48□□□□□ -0.73
CD44-209ENST00000433892 ZNF574Q6ZN55 896 aaPredicted RBP10.48□□□□□ -0.73
CD44-209ENST00000433892 LYG2Q86SG7 212 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 ZNF101Q8IZC7 436 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 ADAD2Q8NCV1 583 aaKnown RBP10.48□□□□□ -0.73
CD44-209ENST00000433892 OR10G3Q8NGC4 313 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 NUBPLQ8TB37 319 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 CASTOR1Q8WTX7 329 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 OR6C1Q96RD1 312 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 VRK1Q99986 396 aaPredicted RBP10.48□□□□□ -0.73
CD44-209ENST00000433892 UQCC2Q9BRT2 126 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 NICN1Q9BSH3 213 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 TNFSF18Q9UNG2 199 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 LHFPL6Q9Y693 200 aa10.48□□□□□ -0.73
CD44-209ENST00000433892 A0A1W2PNR3 127 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 KANTRA0A1W2PQU2 76 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 C9orf170A2RU37 121 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 BCAT2O15382 392 aaPredicted RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 PMP2P02689 132 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 ERCC1P07992 297 aaPredicted RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 UBBP0CG47 229 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 AKR1C4P17516 323 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 ANOS1P23352 680 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 AFF3P51826 1226 aaKnown RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 LUMP51884 338 aaPredicted RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 GPR85P60893 370 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms