RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 STMN4Q9H169 189 aaPredicted RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 CDC42EP4Q9H3Q1 356 aaKnown RBP1.8□□□□□ -2.12
PTPN4-205ENST00000433888 ANKHQ9HCJ1 492 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 MMP26Q9NRE1 261 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 TMEM100Q9NV29 134 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 CLN6Q9NWW5 311 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 GGA2Q9UJY4 613 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 MAP3K15Q6ZN16 1313 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 ADGRA3Q8IWK6 1321 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 FANCIQ9NVI1 1328 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 PLEKHG1Q9ULL1 1385 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 TSPOAP1O95153 1857 aa1.8□□□□□ -2.12
PTPN4-205ENST00000433888 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.79□□□□□ -2.12
PTPN4-205ENST00000433888 SYCE1LA8MT33 242 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 CENPXA8MT69 81 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 HACD1B0YJ81 288 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 H3BNH8 94 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 XKRYO14609 159 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 NDUFS6O75380 124 aaKnown RBP1.79□□□□□ -2.12
PTPN4-205ENST00000433888 GABARAPO95166 117 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 PGA5P0DJD9 388 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 HPGDP15428 266 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 GGT2P36268 569 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 LONP1P36776 959 aaKnown RBP1.79□□□□□ -2.12
PTPN4-205ENST00000433888 KIR3DL2P43630 455 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 CRISP3P54108 245 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 TAS2R46P59540 309 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 SEMG2Q02383 582 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 CYP24A1Q07973 514 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 IFFO1Q0D2I5 559 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 XRCC4Q13426 336 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 STK11Q15831 433 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 TTLL9Q3SXZ7 439 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 ANKRD22Q5VYY1 191 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 CD300LGQ6UXG3 332 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 STRADAQ7RTN6 431 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 UNC93AQ86WB7 457 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 APRG1Q8IVJ8 170 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 FAM58AQ8N1B3 248 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 CBR4Q8N4T8 237 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 SPERTQ8NA61 448 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 OR10J6PQ8NGY7 276 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 ITFG1Q8TB96 612 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 ACTRT1Q8TDG2 376 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 OR8D1Q8WZ84 308 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 TMEM230Q96A57 120 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 FAM131CQ96AQ9 280 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 SGTBQ96EQ0 304 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 NRBF2Q96F24 287 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 DNAJC1Q96KC8 554 aaKnown RBP1.79□□□□□ -2.12
PTPN4-205ENST00000433888 OR2M2Q96R28 347 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 GABRG3Q99928 467 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 MAP1LC3CQ9BXW4 147 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 SLIRPQ9GZT3 109 aaKnown RBP1.79□□□□□ -2.12
PTPN4-205ENST00000433888 DEFB129Q9H1M3 183 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 PORCNQ9H237 461 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 SPNS1Q9H2V7 528 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 RANBP3Q9H6Z4 567 aaPredicted RBP1.79□□□□□ -2.12
PTPN4-205ENST00000433888 UVRAGQ9P2Y5 699 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 TRMT112Q9UI30 125 aaKnown RBP1.79□□□□□ -2.12
PTPN4-205ENST00000433888 PSG8Q9UQ74 426 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 POFUT2Q9Y2G5 429 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 HYOU1Q9Y4L1 999 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 PCDH11XQ9BZA7 1347 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 CENPJQ9HC77 1338 aaPredicted RBP1.79□□□□□ -2.12
PTPN4-205ENST00000433888 PDS5BQ9NTI5 1447 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 GPR179Q6PRD1 2367 aa1.79□□□□□ -2.12
PTPN4-205ENST00000433888 BRWD3Q6RI45 1802 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 AKNAQ7Z591 1439 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 IGLV4-69A0A075B6H9 119 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 TRAV6A0A075B6T7 132 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 A0A0B4J2A0 478 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 PLAC8L1A1L4L8 177 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 MGAT4DA6NG13 374 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 H3BN98 237 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 XRCC2O43543 280 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CHMP2AO43633 222 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 SLC16A7O60669 478 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 PLEKHA8P1O95397 391 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 SNAI1O95863 264 aaPredicted RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 GCGP01275 180 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 IGLV2-23P01705 113 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CT45A6P0DMU7 189 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CT45A5P0DMU8 189 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CT45A7P0DMV0 189 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CCL2P13500 99 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 HOXB8P17481 243 aaPredicted RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CCNOP22674 350 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 HTR2CP28335 458 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CXCL5P42830 114 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 HCAR3P49019 387 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 FABP6P51161 128 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CCNG1P51959 295 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 UBE2E1P51965 193 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 ZNF136P52737 540 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CDKN2DP55273 166 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 HERVK_113P61574 105 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 PPP1CBP62140 327 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 RPS23P62266 143 aaKnown RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 NCF4Q15080 339 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms