RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 TUSC1Q2TAM9 212 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 SLC35F1Q5T1Q4 408 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 ZNF620Q6ZNG0 422 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 NAA40Q86UY6 237 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 ZBTB46Q86UZ6 589 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 ARHGAP24Q8N264 748 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 NSMCE2Q96MF7 247 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 ATF6BQ99941 703 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 HCAR1Q9BXC0 346 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 TMEM165Q9HC07 324 aa18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 PNRC2Q9NPJ4 139 aaKnown RBP18.27■□□□□ 0.52
RPUSD3-206ENST00000433535 IGHV3OR16-10A0A075B7F0 116 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 CD80P33681 288 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 PMELP40967 661 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 TRAP1Q12931 704 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 CLEC12AQ5QGZ9 265 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 DOK3Q7L591 496 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 KLBQ86Z14 1044 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 OR52E2Q8NGJ4 325 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 OR2AJ1Q8NGZ0 328 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 ZMYND19Q96E35 227 aaPredicted RBP18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 C1orf147Q96MC9 270 aaPredicted RBP18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 ZNF48Q96MX3 618 aaPredicted RBP18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 TMEM246Q9BRR3 403 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 CDADC1Q9BWV3 514 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 EGLN3Q9H6Z9 239 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 MRPL22Q9NWU5 206 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 CYB5R1Q9UHQ9 305 aa18.26■□□□□ 0.51
RPUSD3-206ENST00000433535 LCATP04180 440 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 EGR1P18146 543 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 PYCR1P32322 319 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 RPS27P42677 84 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 GNB2P62879 340 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 PAX2Q02962 417 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 PAX8Q06710 450 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 SLC36A3Q495N2 470 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 PGBD2Q6P3X8 592 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 MAP6Q96JE9 813 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 TMEM100Q9NV29 134 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 TMCC3Q9ULS5 477 aa18.25■□□□□ 0.51
RPUSD3-206ENST00000433535 A0A1B0GWJ7 208 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 LRRC30A6NM36 301 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 SPRY1O43609 319 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 IGHV4-38-2P0DP08 117 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 ANOS1P23352 680 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 IFNGR2P38484 337 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 HOXA4Q00056 320 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 TSPAN31Q12999 210 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 ECH1Q13011 328 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 MAB21L1Q13394 359 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 ZNF181Q2M3W8 571 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 ZNF404Q494X3 552 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 PRAMEF6Q5VXH4 476 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 LYPD4Q6UWN0 246 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 ZDHHC21Q8IVQ6 265 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 CYB561A3Q8NBI2 242 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 C19orf18Q8NEA5 215 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 OR9Q2Q8NGE9 314 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 OR10S1Q8NGN2 331 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 GNPDA2Q8TDQ7 276 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 SLCO4A1Q96BD0 722 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 SLC7A6OSQ96CW6 309 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 IL1RAPQ9NPH3 570 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 MIOXQ9UGB7 285 aa18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 PRPF19Q9UMS4 504 aaKnown RBP18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 SOX21Q9Y651 276 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-206ENST00000433535 IGHV2-70DA0A0C4DH43 119 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 IDH3BO43837 385 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 PSKH1P11801 424 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 MALLQ13021 153 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 BTNL3Q6UXE8 466 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 PGAP1Q75T13 922 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 MRPL21Q7Z2W9 205 aaKnown RBP18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 C1orf87Q8N0U7 546 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 PARP8Q8N3A8 854 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 OR8B3Q8NGG8 313 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 NEIL1Q96FI4 390 aaPredicted RBP18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 OR8B2Q96RD0 313 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 MS4A7Q9GZW8 240 aaPredicted RBP18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 UFSP2Q9NUQ7 469 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 ACTR3BQ9P1U1 418 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 PCDHGB1Q9Y5G3 927 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 CDH10Q9Y6N8 788 aa18.23■□□□□ 0.51
RPUSD3-206ENST00000433535 TRAV40A0A0B4J280 105 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 TVP23AA6NH52 213 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 M0R135 149 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 FAM20BO75063 409 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 HKR1P10072 659 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 PRTN3P24158 256 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 GATA4P43694 442 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 PITPNBP48739 271 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 MS4A2Q01362 244 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 BAMBIQ13145 260 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 SNAI3Q3KNW1 292 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 LYPD2Q6UXB3 125 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 PROKR2Q8NFJ6 384 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 OR52L1Q8NGH7 329 aa18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 SPRYD4Q8WW59 207 aaPredicted RBP18.22■□□□□ 0.51
RPUSD3-206ENST00000433535 ZNRF4Q8WWF5 429 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms