RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 OR5L1Q8NGL2 311 aa13.61□□□□□ -0.23
PTPRA-206ENST00000430705 OR4C15Q8NGM1 316 aa13.61□□□□□ -0.23
PTPRA-206ENST00000430705 GCDHQ92947 438 aaPredicted RBP13.61□□□□□ -0.23
PTPRA-206ENST00000430705 ZNF582Q96NG8 517 aaPredicted RBP13.61□□□□□ -0.23
PTPRA-206ENST00000430705 TMEM246Q9BRR3 403 aa13.61□□□□□ -0.23
PTPRA-206ENST00000430705 VNN3Q9NY84 501 aa13.61□□□□□ -0.23
PTPRA-206ENST00000430705 NUP50Q9UKX7 468 aa13.61□□□□□ -0.23
PTPRA-206ENST00000430705 LRCH1Q9Y2L9 728 aa13.61□□□□□ -0.23
PTPRA-206ENST00000430705 LYVE1Q9Y5Y7 322 aa13.61□□□□□ -0.23
PTPRA-206ENST00000430705 AUP1Q9Y679 476 aa13.61□□□□□ -0.23
PTPRA-206ENST00000430705 DNAJC9-AS1A6NH13 148 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 F5H5K5 113 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 GMNNO75496 209 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 IGHV4-38-2P0DP08 117 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 GATA4P43694 442 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 SRP9P49458 86 aaKnown RBP13.6□□□□□ -0.23
PTPRA-206ENST00000430705 SNAI3Q3KNW1 292 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 ZNF404Q494X3 552 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 ESCO2Q56NI9 601 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 AWAT1Q58HT5 328 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 PRAMEF6Q5VXH4 476 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 SLC27A4Q6P1M0 643 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 ZDHHC21Q8IVQ6 265 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 CYB561A3Q8NBI2 242 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 GNPDA2Q8TDQ7 276 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 DUX5Q96PT3 197 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 PITX2Q99697 317 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 SSBP3Q9BWW4 388 aaPredicted RBP13.6□□□□□ -0.23
PTPRA-206ENST00000430705 TAGLN3Q9UI15 199 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 CDH10Q9Y6N8 788 aa13.6□□□□□ -0.23
PTPRA-206ENST00000430705 MGAM2Q2M2H8 2515 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 TCRBV5S2A0A599 114 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 TVP23AA6NH52 213 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 IFNL4K9M1U5 179 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 RPS2P15880 293 aaKnown RBP13.59□□□□□ -0.23
PTPRA-206ENST00000430705 EGR1P18146 543 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 OTX1P32242 354 aaPredicted RBP13.59□□□□□ -0.23
PTPRA-206ENST00000430705 MAGEA2P43356 314 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 HMGA2P52926 109 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 LYPD2Q6UXB3 125 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 DEFB107AQ8IZN7 70 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 C19orf18Q8NEA5 215 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 MCUR1Q96AQ8 359 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 DDX28Q9NUL7 540 aaKnown RBP13.59□□□□□ -0.23
PTPRA-206ENST00000430705 OR5V1Q9UGF6 321 aa13.59□□□□□ -0.23
PTPRA-206ENST00000430705 IGHV3OR16-10A0A075B7F0 116 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 IGHV2-70DA0A0C4DH43 119 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 ATP8B1O43520 1251 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 IDH3BO43837 385 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 FAM20BO75063 409 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 FSTL3O95633 263 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 LCATP04180 440 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 FPR2P25090 351 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 NOS3P29474 1203 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 CD200P41217 278 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 PPP1R8Q12972 351 aaKnown RBP13.58□□□□□ -0.24
PTPRA-206ENST00000430705 ECH1Q13011 328 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 MPPED2Q15777 294 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 SLC36A3Q495N2 470 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 CYP2R1Q6VVX0 501 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 ZNF841Q6ZN19 808 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 PIGWQ7Z7B1 504 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 SLC37A3Q8NCC5 494 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 OR51L1Q8NGJ5 315 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 OR9Q1Q8NGQ5 310 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 OR4Q3Q8NH05 313 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 OR2AE1Q8NHA4 323 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 Q8TCH9 128 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 TAF15Q92804 592 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTPRA-206ENST00000430705 MRI1Q9BV20 369 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 HCAR1Q9BXC0 346 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 NSRP1Q9H0G5 558 aaKnown RBP13.58□□□□□ -0.24
PTPRA-206ENST00000430705 NTN4Q9HB63 628 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 TMEM100Q9NV29 134 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 COMMD3-BMI1R4GMX3 469 aa13.58□□□□□ -0.24
PTPRA-206ENST00000430705 M0R135 149 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 PTBP3O95758 552 aaKnown RBP13.57□□□□□ -0.24
PTPRA-206ENST00000430705 PLATP00750 562 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 GASTP01350 101 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 HLA-DQA2P01906 255 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 HKR1P10072 659 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 IFNGR2P38484 337 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 ZNF92Q03936 586 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 GLYATL3Q5SZD4 288 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 CPLX4Q7Z7G2 160 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 PARP8Q8N3A8 854 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 C3orf56Q8N813 242 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 OR2AJ1Q8NGZ0 328 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 UPRTQ96BW1 309 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 NEIL1Q96FI4 390 aaPredicted RBP13.57□□□□□ -0.24
PTPRA-206ENST00000430705 ZNF799Q96GE5 643 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 CDADC1Q9BWV3 514 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 IL20Q9NYY1 176 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 CTSZQ9UBR2 303 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 KCNG2Q9UJ96 466 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 TMCC3Q9ULS5 477 aa13.57□□□□□ -0.24
PTPRA-206ENST00000430705 MDFIC2A0A1B0GVS7 189 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 C22orf46C9J442 243 aa13.56□□□□□ -0.24
PTPRA-206ENST00000430705 FCN3O75636 299 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms