RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 LYVE1Q9Y5Y7 322 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 AUP1Q9Y679 476 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 IGHV3OR16-10A0A075B7F0 116 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 TVP23AA6NH52 213 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 SURF4O15260 269 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 RENP00797 406 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 GASTP01350 101 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 IGHV4-38-2P0DP08 117 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 SMIM11AP58511 58 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 MPPED2Q15777 294 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 SNAI3Q3KNW1 292 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 SAMD4BQ5PRF9 694 aaKnown RBP14.29□□□□□ -0.12
CPSF4-203ENST00000430038 DNM1P34Q6PK57 102 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 CYP2R1Q6VVX0 501 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 CPLX4Q7Z7G2 160 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 BPIFB2Q8N4F0 458 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 OR5L1Q8NGL2 311 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 POP5Q969H6 163 aaKnown RBP14.29□□□□□ -0.12
CPSF4-203ENST00000430038 KRCC1Q9NPI7 259 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-203ENST00000430038 MGAM2Q2M2H8 2515 aa14.29□□□□□ -0.12
CPSF4-203ENST00000430038 TCRBV5S2A0A599 114 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 GMNNO75496 209 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 RAD23AP54725 363 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 ZNF92Q03936 586 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 TRAP1Q12931 704 aaKnown RBP14.28□□□□□ -0.12
CPSF4-203ENST00000430038 SCGB2A2Q13296 93 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 PRAMEF6Q5VXH4 476 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 SLC27A4Q6P1M0 643 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 PGM2L1Q6PCE3 622 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 KLBQ86Z14 1044 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 CMYA5Q8N3K9 4069 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 TEX29Q8N6K0 151 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 OR2AE1Q8NHA4 323 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 ATF6BQ99941 703 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 TMEM100Q9NV29 134 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 NUP50Q9UKX7 468 aa14.28□□□□□ -0.12
CPSF4-203ENST00000430038 ATP8B1O43520 1251 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 IDH3BO43837 385 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 FCN3O75636 299 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 HLA-DQA2P01906 255 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 LCATP04180 440 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 CLUP10909 449 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 NOS3P29474 1203 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 SRP9P49458 86 aaKnown RBP14.27□□□□□ -0.13
CPSF4-203ENST00000430038 MS4A2Q01362 244 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 ZNF404Q494X3 552 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 AWAT1Q58HT5 328 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 ZNF841Q6ZN19 808 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 OR9Q1Q8NGQ5 310 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 OR4Q3Q8NH05 313 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 RBM4Q9BWF3 364 aaKnown RBP14.27□□□□□ -0.13
CPSF4-203ENST00000430038 IL20Q9NYY1 176 aa14.27□□□□□ -0.13
CPSF4-203ENST00000430038 FAM20BO75063 409 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 GYPBP06028 91 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 FPR2P25090 351 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 OTX1P32242 354 aaPredicted RBP14.26□□□□□ -0.13
CPSF4-203ENST00000430038 MAGEA2P43356 314 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 GATA4P43694 442 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 GNGT1P63211 74 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 ZNF181Q2M3W8 571 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 SLC36A3Q495N2 470 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 ESCO2Q56NI9 601 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 ARMCX4Q5H9R4 360 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 DOK3Q7L591 496 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 ZNF511Q8NB15 262 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 SLC37A3Q8NCC5 494 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 OR2AJ1Q8NGZ0 328 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 MCUR1Q96AQ8 359 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 JMJD8Q96S16 334 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 CDADC1Q9BWV3 514 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 SSBP3Q9BWW4 388 aaPredicted RBP14.26□□□□□ -0.13
CPSF4-203ENST00000430038 UFSP2Q9NUQ7 469 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 TMCC3Q9ULS5 477 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 LRCH1Q9Y2L9 728 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 ARL2BPQ9Y2Y0 163 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 CDH10Q9Y6N8 788 aa14.26□□□□□ -0.13
CPSF4-203ENST00000430038 IGHV2-70DA0A0C4DH43 119 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 DNAJC9-AS1A6NH13 148 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 M0R135 149 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 TNFRSF11BO00300 401 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 TNFRSF13BO14836 293 aaPredicted RBP14.25□□□□□ -0.13
CPSF4-203ENST00000430038 RPS2P15880 293 aaKnown RBP14.25□□□□□ -0.13
CPSF4-203ENST00000430038 CA6P23280 308 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 CD200P41217 278 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 GLYATL3Q5SZD4 288 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 MUC20Q8N307 709 aaPredicted RBP14.25□□□□□ -0.13
CPSF4-203ENST00000430038 FITM2Q8N6M3 262 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 C3orf56Q8N813 242 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 ZNF799Q96GE5 643 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 HCAR1Q9BXC0 346 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 NMNAT2Q9BZQ4 307 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 NSRP1Q9H0G5 558 aaKnown RBP14.25□□□□□ -0.13
CPSF4-203ENST00000430038 PPP1R3EQ9H7J1 279 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 DDX28Q9NUL7 540 aaKnown RBP14.25□□□□□ -0.13
CPSF4-203ENST00000430038 CTSZQ9UBR2 303 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 COMMD3-BMI1R4GMX3 469 aa14.25□□□□□ -0.13
CPSF4-203ENST00000430038 MDFIC2A0A1B0GVS7 189 aa14.24□□□□□ -0.13
CPSF4-203ENST00000430038 CD300LBA8K4G0 201 aa14.24□□□□□ -0.13
CPSF4-203ENST00000430038 SLC2A1P11166 492 aa14.24□□□□□ -0.13
CPSF4-203ENST00000430038 PRTN3P24158 256 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms