RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 PGAP1Q75T13 922 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 SPATA24Q86W54 205 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
IMP4-204ENST00000428740 OR5AS1Q8N127 324 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 MUC20Q8N307 709 aaPredicted RBP12.68□□□□□ -0.38
IMP4-204ENST00000428740 OR4M2Q8NGB6 313 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 OR4Q3Q8NH05 313 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 ITLN1Q8WWA0 313 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 ERGIC1Q969X5 290 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 ZNF799Q96GE5 643 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 MAP6Q96JE9 813 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 OR2V2Q96R30 315 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 LPAR2Q9HBW0 351 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 DDX28Q9NUL7 540 aaKnown RBP12.68□□□□□ -0.38
IMP4-204ENST00000428740 VNN3Q9NY84 501 aa12.68□□□□□ -0.38
IMP4-204ENST00000428740 PPIAL4EA0A075B759 164 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 A0A0A6YYJ9 748 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 PPIAL4CA0A0B4J2A2 164 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 TVP23AA6NH52 213 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 PPIAL4DF5H284 164 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 SOX14O95416 240 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 FSTL3O95633 263 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 IGHV2-70P01814 119 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 PPIAL4FP0DN26 164 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 SPI1P17947 270 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 GK2Q14410 553 aaPredicted RBP12.67□□□□□ -0.38
IMP4-204ENST00000428740 RHOUQ7L0Q8 258 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 MRPL21Q7Z2W9 205 aaKnown RBP12.67□□□□□ -0.38
IMP4-204ENST00000428740 DCXRQ7Z4W1 244 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 C1orf87Q8N0U7 546 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 CELF2-AS1Q8N7Q2 184 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 OR51L1Q8NGJ5 315 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 OR9Q1Q8NGQ5 310 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 SPRYD4Q8WW59 207 aaPredicted RBP12.67□□□□□ -0.38
IMP4-204ENST00000428740 SLCO4A1Q96BD0 722 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 KCNJ15Q99712 375 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 NIPSNAP1Q9BPW8 284 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 OPA3Q9H6K4 179 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 GCM1Q9NP62 436 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 ARMC1Q9NVT9 282 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 PDP1Q9P0J1 537 aaPredicted RBP12.67□□□□□ -0.38
IMP4-204ENST00000428740 DNAJB9Q9UBS3 223 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 COMMD3-BMI1R4GMX3 469 aa12.67□□□□□ -0.38
IMP4-204ENST00000428740 A0A1B0GWJ7 208 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 TMEM178BH3BS89 294 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 TCF21O43680 179 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 ATP5HO75947 161 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 SPARCP09486 303 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 OTX1P32242 354 aaPredicted RBP12.66□□□□□ -0.38
IMP4-204ENST00000428740 MDH2P40926 338 aaKnown RBP12.66□□□□□ -0.38
IMP4-204ENST00000428740 SLC6A9P48067 706 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 RAD23AP54725 363 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 BTG1P62324 171 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 GRB2P62993 217 aaKnown RBP12.66□□□□□ -0.38
IMP4-204ENST00000428740 ZNF181Q2M3W8 571 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 DCAF12L2Q5VW00 463 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 SHFQ7M4L6 423 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 NAA40Q86UY6 237 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 ZNF511Q8NB15 262 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 PAPD5Q8NDF8 572 aaKnown RBP12.66□□□□□ -0.38
IMP4-204ENST00000428740 OR6K6Q8NGW6 343 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 DNAJC9Q8WXX5 260 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 SLC7A6OSQ96CW6 309 aaPredicted RBP12.66□□□□□ -0.38
IMP4-204ENST00000428740 SLAMF6Q96DU3 332 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 NRBF2Q96F24 287 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 MEGF10Q96KG7 1140 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 COPS4Q9BT78 406 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 TOR3AQ9H497 397 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 WDR76Q9H967 626 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 PATZ1Q9HBE1 687 aaKnown RBP12.66□□□□□ -0.38
IMP4-204ENST00000428740 G6PC2Q9NQR9 355 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 CENPMQ9NSP4 180 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 UBAP1Q9NZ09 502 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 POMPQ9Y244 141 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 MALRD1Q5VYJ5 2156 aa12.66□□□□□ -0.38
IMP4-204ENST00000428740 ZNF878C9JN71 531 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 GMDSO60547 372 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 OSMP13725 252 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 IRF2P14316 349 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 POU1F1P28069 291 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 DDOSTP39656 456 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 ERFP50548 548 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 CBX1P83916 185 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 MZT1Q08AG7 82 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 GINS1Q14691 196 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 SPRNQ5BIV9 151 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 KLBQ86Z14 1044 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 SPERTQ8NA61 448 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 PLPP7Q8NBV4 271 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 ZNRF4Q8WWF5 429 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 INTS14Q96SY0 518 aa12.65□□□□□ -0.38
IMP4-204ENST00000428740 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
IMP4-204ENST00000428740 MMADHCQ9H3L0 296 aaPredicted RBP12.65□□□□□ -0.38
IMP4-204ENST00000428740 METTL17Q9H7H0 456 aaPredicted RBP12.65□□□□□ -0.38
IMP4-204ENST00000428740 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.392e-8■■■■□ 21.2
IMP4-204ENST00000428740 TCRBV3S1A0A5B6 114 aa12.64□□□□□ -0.39
IMP4-204ENST00000428740 GGT3PA6NGU5 568 aa12.64□□□□□ -0.39
IMP4-204ENST00000428740 PRR23D1E9PI22 279 aaPredicted RBP12.64□□□□□ -0.39
IMP4-204ENST00000428740 GSC2O15499 205 aa12.64□□□□□ -0.39
IMP4-204ENST00000428740 XRCC2O43543 280 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms