RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ZBTB46Q86UZ6 589 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 ZDHHC21Q8IVQ6 265 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 C1orf87Q8N0U7 546 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 C19orf18Q8NEA5 215 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 OR9Q2Q8NGE9 314 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 GNPDA2Q8TDQ7 276 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 ZNF48Q96MX3 618 aaPredicted RBP14.3□□□□□ -0.12
TRIM39-209ENST00000428728 CDRT15Q96T59 188 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 EGLN3Q9H6Z9 239 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 TMEM165Q9HC07 324 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 PNRC2Q9NPJ4 139 aaKnown RBP14.3□□□□□ -0.12
TRIM39-209ENST00000428728 MRPL22Q9NWU5 206 aaKnown RBP14.3□□□□□ -0.12
TRIM39-209ENST00000428728 CYB5R1Q9UHQ9 305 aa14.3□□□□□ -0.12
TRIM39-209ENST00000428728 IGHV2-70DA0A0C4DH43 119 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 M0R135 149 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 SPRY1O43609 319 aaPredicted RBP14.29□□□□□ -0.12
TRIM39-209ENST00000428728 IGHV4-38-2P0DP08 117 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 IRF2P14316 349 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 CD80P33681 288 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 PMELP40967 661 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 TSPAN31Q12999 210 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 ECH1Q13011 328 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 ZNF181Q2M3W8 571 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 ZNF404Q494X3 552 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 PRAMEF6Q5VXH4 476 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 LYPD4Q6UWN0 246 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 BTNL3Q6UXE8 466 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 MRPL21Q7Z2W9 205 aaKnown RBP14.29□□□□□ -0.12
TRIM39-209ENST00000428728 PARP8Q8N3A8 854 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 CYB561A3Q8NBI2 242 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 PROKR2Q8NFJ6 384 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 OR8B3Q8NGG8 313 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 OR52L1Q8NGH7 329 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 SLCO4A1Q96BD0 722 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 NEIL1Q96FI4 390 aaPredicted RBP14.29□□□□□ -0.12
TRIM39-209ENST00000428728 ZNF799Q96GE5 643 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 PLEKHA8Q96JA3 519 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 MAP6Q96JE9 813 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 C1orf147Q96MC9 270 aaPredicted RBP14.29□□□□□ -0.12
TRIM39-209ENST00000428728 OR8B2Q96RD0 313 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 MS4A7Q9GZW8 240 aaPredicted RBP14.29□□□□□ -0.12
TRIM39-209ENST00000428728 IL1RAPQ9NPH3 570 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 UFSP2Q9NUQ7 469 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 ARL8BQ9NVJ2 186 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 MIOXQ9UGB7 285 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 CD300AQ9UGN4 299 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 PCDHGB1Q9Y5G3 927 aa14.29□□□□□ -0.12
TRIM39-209ENST00000428728 TRAV40A0A0B4J280 105 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 TVP23AA6NH52 213 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 IDH3BO43837 385 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 FAM20BO75063 409 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 ZNF823P16415 610 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 EGR1P18146 543 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 PRTN3P24158 256 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 PITPNBP48739 271 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 TPTEP56180 551 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 MXRA7P84157 204 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 PAX2Q02962 417 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 PAX8Q06710 450 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 BAMBIQ13145 260 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 TUSC1Q2TAM9 212 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 PGAP1Q75T13 922 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 NLRC3Q7RTR2 1065 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 OR10S1Q8NGN2 331 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 OR2AE1Q8NHA4 323 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 SPRYD4Q8WW59 207 aaPredicted RBP14.28□□□□□ -0.12
TRIM39-209ENST00000428728 BTBD10Q9BSF8 475 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 TAGLN3Q9UI15 199 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 CDH10Q9Y6N8 788 aa14.28□□□□□ -0.12
TRIM39-209ENST00000428728 A0A1B0GWJ7 208 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 HKR1P10072 659 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 PSKH1P11801 424 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 ANOS1P23352 680 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 GATA4P43694 442 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 HOXA4Q00056 320 aaPredicted RBP14.27□□□□□ -0.13
TRIM39-209ENST00000428728 MAB21L1Q13394 359 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 OR8G1Q15617 311 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 SNAI3Q3KNW1 292 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 LYPD2Q6UXB3 125 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 CYP2R1Q6VVX0 501 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 DEFB107AQ8IZN7 70 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 OR51L1Q8NGJ5 315 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 OR9Q1Q8NGQ5 310 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 OR11L1Q8NGX0 322 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 RAB40AQ8WXH6 277 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 SPTSSAQ969W0 71 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 ADAT1Q9BUB4 502 aaKnown RBP14.27□□□□□ -0.13
TRIM39-209ENST00000428728 KCNG2Q9UJ96 466 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 LYVE1Q9Y5Y7 322 aa14.27□□□□□ -0.13
TRIM39-209ENST00000428728 SOX21Q9Y651 276 aaPredicted RBP14.27□□□□□ -0.13
TRIM39-209ENST00000428728 BHLHE40O14503 412 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 ATP6V1B2P21281 511 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 CA6P23280 308 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 CD200P41217 278 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 RAD23AP54725 363 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 FOXL1Q12952 345 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 MPPED2Q15777 294 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 RPL13AP3Q6NVV1 102 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 C16orf89Q6UX73 402 aa14.26□□□□□ -0.13
TRIM39-209ENST00000428728 LRRN1Q6UXK5 716 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms