RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SERPINA12Q8IW75 414 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 ZNF100Q8IYN0 542 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 DNAAF1Q8NEP3 725 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 OR1F12Q8NHA8 337 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 ZNF671Q8TAW3 534 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 LGALS14Q8TCE9 139 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 C14orf119Q9NWQ9 140 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 TAS2R4Q9NYW5 299 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 ZNF224Q9NZL3 707 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 UPB1Q9UBR1 384 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 ATPIF1Q9UII2 106 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 ATMQ13315 3056 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 BSNQ9UPA5 3926 aa13.3□□□□□ -0.28
ACTB-204ENST00000425660 E9PLN8 166 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 LMX1BO60663 402 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 IL7P13232 177 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 AZGP1P25311 298 aaKnown RBP13.29□□□□□ -0.28
ACTB-204ENST00000425660 ARF1P84077 181 aaKnown RBP13.29□□□□□ -0.28
ACTB-204ENST00000425660 IL18Q14116 193 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 UBE2NLQ5JXB2 153 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 ZNF774Q6NX45 483 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 FAM57BQ71RH2 274 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 DOK3Q7L591 496 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 FGD2Q7Z6J4 655 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 NAA40Q86UY6 237 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 LYPD6Q86Y78 171 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 NKAIN3Q8N8D7 197 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 OR4M1Q8NGD0 313 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 FGFBP3Q8TAT2 258 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 WNT5BQ9H1J7 359 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 GPR84Q9NQS5 396 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 STEAP1Q9UHE8 339 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 LHX6Q9UPM6 363 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 ETV7Q9Y603 341 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 ACACAQ13085 2346 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 LOC390937A0A1W2PQ73 354 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 AHRRA9YTQ3 701 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 SLC17A2O00624 439 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 RRP8O43159 456 aaKnown RBP13.29□□□□□ -0.28
ACTB-204ENST00000425660 HLA-DQB1P01920 261 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 ITGA5P08648 1049 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 DBHP09172 617 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 CSF3P09919 207 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 DDOSTP39656 456 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 OR3A2P47893 321 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 FBXW9Q5XUX1 488 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 OR8H2Q8N162 312 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 OR52H1Q8NGJ2 320 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 OR1J2Q8NGS2 313 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 SETD6Q8TBK2 473 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 SLC7A6Q92536 515 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 FGGYQ96C11 551 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 ADAT3Q96EY9 351 aaPredicted RBP13.29□□□□□ -0.28
ACTB-204ENST00000425660 ABHD17AQ96GS6 310 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 ABCG5Q9H222 651 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 OR5V1Q9UGF6 321 aa13.29□□□□□ -0.28
ACTB-204ENST00000425660 PTTG1O95997 202 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 ADRB1P08588 477 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 PATE4P0C8F1 98 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 NR4A2P43354 598 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 SLC6A9P48067 706 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 PITPNBP48739 271 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 FOXG1P55316 489 aaPredicted RBP13.28□□□□□ -0.28
ACTB-204ENST00000425660 CLDN12P56749 244 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 FAPQ12884 760 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 SLC36A2Q495M3 483 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 PYDC2Q56P42 97 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 GLT8D1Q68CQ7 371 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 P4HA3Q7Z4N8 544 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 Q8N402 240 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 CCDC54Q8NEL0 328 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 OR51A2Q8NGJ7 313 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 OR5D14Q8NGL3 314 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 WNT2BQ93097 391 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 SLC25A38Q96DW6 304 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 PGAM5Q96HS1 289 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 SP140LQ9H930 580 aa13.28□□□□□ -0.28
ACTB-204ENST00000425660 A0A0G2JMP0 313 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 A0A0X1KG70 313 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 MED19A0JLT2 244 aaPredicted RBP13.27□□□□□ -0.28
ACTB-204ENST00000425660 C5orf63A6NC05 138 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 CRYABP02511 175 aaKnown RBP13.27□□□□□ -0.28
ACTB-204ENST00000425660 MPGP29372 298 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 TPTEP56180 551 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 DEFA1P59665 94 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 DEFA3P59666 94 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 TRIM16LQ309B1 348 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 PLEKHN1Q494U1 663 aaPredicted RBP13.27□□□□□ -0.28
ACTB-204ENST00000425660 FAM214BQ7L5A3 538 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 UBE2J2Q8N2K1 259 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 OR4M2Q8NGB6 313 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 AKR7LQ8NHP1 331 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 COX4I2Q96KJ9 171 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 LYZL4Q96KX0 146 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 TRIB1Q96RU8 372 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 SOX7Q9BT81 388 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 PRSS50Q9UI38 385 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 TBC1D24Q9ULP9 559 aa13.27□□□□□ -0.28
ACTB-204ENST00000425660 URB1O60287 2271 aaKnown RBP13.27□□□□□ -0.29
ACTB-204ENST00000425660 A0A1W2PQ09 198 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms