RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 NUP54Q7Z3B4 507 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 GRINAQ7Z429 371 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 WDFY1Q8IWB7 410 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 PAQR4Q8N4S7 273 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC26A10Q8NG04 563 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 OR4K15Q8NH41 348 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 ELP5Q8TE02 316 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 TMED6Q8WW62 240 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 MRGPRFQ96AM1 343 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 CYYR1Q96J86 154 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 TPSD1Q9BZJ3 242 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 POLR1DQ9Y2S0 133 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 KCNK7Q9Y2U2 307 aa6.72□□□□□ -1.33
SMARCC1-202ENST00000425518 PCNX3Q9H6A9 2034 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 TMEM218A2RU14 115 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 CPED1A4D0V7 1026 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 TTLL8A6PVC2 850 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 EFSO43281 561 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 OR2T1O43869 369 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 TSPAN2O60636 221 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 MPIG6BO95866 241 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 VSIG8P0DPA2 414 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 FSTP19883 344 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 GABRA4P48169 554 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 EFNA3P52797 238 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 EMP2P54851 167 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 TLE3Q04726 772 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF345Q14585 488 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 ELAVL1Q15717 326 aaKnown RBP6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 CCDC157Q569K6 752 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 PTCRAQ6ISU1 281 aaPredicted RBP6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 CBLN2Q8IUK8 224 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 PUSL1Q8N0Z8 303 aaKnown RBP6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 OR4K17Q8NGC6 315 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 OR5AP2Q8NGF4 316 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 DAZLQ92904 295 aaKnown RBP6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 CPNE2Q96FN4 548 aaPredicted RBP6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 NICN1Q9BSH3 213 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 WWTR1Q9GZV5 400 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 BANF2Q9H503 90 aa6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 MYOZ1Q9NP98 299 aaPredicted RBP6.71□□□□□ -1.33
SMARCC1-202ENST00000425518 UNC13CQ8NB66 2214 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 A0A0A6YYH2 397 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 A6NJ64 397 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 ABCD4O14678 606 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 NPIPB7O75200 414 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 SRSF3P84103 164 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 SHHQ15465 462 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 LANCL3Q6ZV70 420 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 FOXRED2Q8IWF2 684 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 OR1M1Q8NGA1 313 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 ST7LQ8TDW4 575 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 FAM117AQ9C073 453 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF768Q9H5H4 540 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 OR6C76A6NM76 312 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 MS4A18H0YCH9 400 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 NUDT21O43809 227 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 ADAP1O75689 374 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 ABOP16442 354 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 GALNSP34059 522 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 MS4A18Q3C1V0 323 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 NKAPLQ5M9Q1 402 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 DNM1P34Q6PK57 102 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 TMEM200AQ86VY9 491 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 SLC22A24Q8N4F4 322 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 NKAIN3Q8N8D7 197 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 OR10R2Q8NGX6 335 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 OR51E1Q8TCB6 317 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 C11orf40Q8WZ69 217 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 SLAMF6Q96DU3 332 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 CDCA3Q99618 268 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 DUSP15Q9H1R2 295 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 GSKIPQ9P0R6 139 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 SUSD2Q9UGT4 822 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 PURGQ9UJV8 347 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 MMP17Q9ULZ9 603 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 MMACHCQ9Y4U1 282 aa6.71□□□□□ -1.34
SMARCC1-202ENST00000425518 TLCD2A6NGC4 264 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 CRHP06850 196 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF20P17024 532 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF93P35789 620 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 DCAF7P61962 342 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 PLEKHN1Q494U1 663 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 AKIRIN2Q53H80 203 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 PABPC1L2AQ5JQF8 200 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF813Q6ZN06 617 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 LDLRAD3Q86YD5 345 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 OR5D14Q8NGL3 314 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 PHYHIPLQ96FC7 376 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 MESP1Q9BRJ9 268 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 SOX7Q9BT81 388 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 PBOV1Q9GZY1 135 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 A0A1W2PP11 408 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 A0A1W2PPC4 97 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 RHPN2P1A8MT19 583 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 MPTX1A8MV57 137 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF705EA8MWA4 302 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 SIGLEC6O43699 453 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF217O75362 1048 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms