RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ECH1Q13011 328 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 GAGE5Q13069 117 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 GAGE6Q13070 117 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF154Q13106 437 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 PTGR1Q14914 329 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 NFATC4Q14934 902 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ATP6AP1Q15904 470 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 CLEC12BQ2HXU8 276 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 SLC25A35Q3KQZ1 300 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ODF3L2Q3SX64 289 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 VAX1Q5SQQ9 334 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM42Q69YG0 159 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF549Q6P9A3 640 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 CASP12Q6UXS9 341 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 APOOLQ6UXV4 268 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 Q6ZTK2 550 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 SLC36A1Q7Z2H8 476 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 FAM19A1Q7Z5A9 133 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 S100A7AQ86SG5 101 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM150AQ86TG1 271 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 LACC1Q8IV20 430 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ODF3L1Q8IXM7 274 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 CPNE9Q8IYJ1 553 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 SVOPLQ8N434 492 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 METTL13Q8N6R0 699 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 OR4K17Q8NGC6 315 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 OR10W1Q8NGF6 305 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 OR10X1Q8NGY0 326 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 COQ8AQ8NI60 647 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 FNDC8Q8TC99 324 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 CRYGNQ8WXF5 182 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM234Q8WY98 164 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 RERGQ96A58 199 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-205ENST00000424674 TCEAL4Q96EI5 215 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 IMP4Q96G21 291 aaKnown RBP3.07□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM80Q96HE8 168 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM56Q96MV1 263 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 NODALQ96S42 347 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 VAT1Q99536 393 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 DHRS9Q9BPW9 319 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 HOPXQ9BPY8 73 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-205ENST00000424674 AIF1LQ9BQI0 150 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM109Q9BVC6 243 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 NUDT9Q9BW91 350 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 HCAR1Q9BXC0 346 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 UGT2B28Q9BY64 529 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 PRORYQ9H606 182 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF430Q9H8G1 570 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-205ENST00000424674 PLEKHA3Q9HB20 300 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ELL3Q9HB65 397 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-205ENST00000424674 FAM206AQ9NX38 181 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 TAS2R16Q9NYV7 291 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 NUDT4Q9NZJ9 180 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 Q9UF83 564 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ENOPH1Q9UHY7 261 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 CD84Q9UIB8 345 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 CES1P1Q9UKY3 287 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 VDAC3Q9Y277 283 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 L3MBTL1Q9Y468 752 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 PBRM1Q86U86 1689 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 ARID2Q68CP9 1835 aa3.07□□□□□ -1.92
SF3B1-205ENST00000424674 IGLV9-49A0A0B4J1Y8 123 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 TMEM272A0A1B0GTI8 110 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 MEIOCA2RUB1 952 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 ISPDA4D126 451 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 ZNF814B7Z6K7 855 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 ANKRD63C9JTQ0 380 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 SMKR1H3BMG3 65 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 M0R1B8 84 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 SULT2B1O00204 365 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 AZIN1O14977 448 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 SPRY3O43610 288 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 BUB3O43684 328 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 TYROBPO43914 113 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 MGRN1O60291 552 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 RAD1O60671 282 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 DPM1O60762 260 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 ZG16O60844 167 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 SUPT3HO75486 399 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 SLC22A5O76082 557 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 NDUFB8O95169 186 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 HPRT1P00492 218 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 OXTP01178 125 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 CD8AP01732 235 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 HOXC4P09017 264 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-205ENST00000424674 SCGB1A1P11684 91 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 PVRP15151 417 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 ALOX5APP20292 161 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 RPS12P25398 132 aaKnown RBP3.06□□□□□ -1.92
SF3B1-205ENST00000424674 HTR1EP28566 365 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 FCGR2CP31995 323 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 RORCP51449 518 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 RAB25P57735 213 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 OR12D2P58182 307 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 NANOS2P60321 138 aaKnown RBP3.06□□□□□ -1.92
SF3B1-205ENST00000424674 FCHO2Q0JRZ9 810 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 TOMM34Q15785 309 aaPredicted RBP3.06□□□□□ -1.92
SF3B1-205ENST00000424674 ZIC1Q15915 447 aa3.06□□□□□ -1.92
SF3B1-205ENST00000424674 HIST3H3Q16695 136 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms