RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PCTPQ9UKL6 214 aa3.99□□□□□ -1.77
SFXN1-202ENST00000421887 CAB39Q9Y376 341 aaPredicted RBP3.99□□□□□ -1.77
SFXN1-202ENST00000421887 TMED7Q9Y3B3 224 aa3.99□□□□□ -1.77
SFXN1-202ENST00000421887 USH1CQ9Y6N9 552 aa3.99□□□□□ -1.77
SFXN1-202ENST00000421887 TENM2Q9NT68 2774 aa3.99□□□□□ -1.77
SFXN1-202ENST00000421887 NUP214P35658 2090 aaPredicted RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 IGLV3-9A0A075B6K5 115 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 TRAV34A0A0B4J273 112 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 WI2-2373I1.2A0A1W2PRP0 233 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 RNASEK-C17orf49H0YIS7 233 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 RPL36A-HNRNPH2H7BZ11 118 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 OGG1O15527 345 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 ENTPD5O75356 428 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 UBL3O95164 117 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 KLHL2O95198 593 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 IGHV1-46P01743 117 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 IGHV2-70P01814 119 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 HIST1H2ABP04908 130 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 IFNW1P05000 195 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 RBP1P09455 135 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 MMP9P14780 707 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 ZNF250P15622 560 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 ZNF14P17017 642 aaPredicted RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 ANXA7P20073 488 aaKnown RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 CXCR1P25024 350 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 MC5RP33032 325 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 MDH2P40926 338 aaKnown RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 GPR12P47775 334 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 IDH2P48735 452 aaKnown RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 CENPAP49450 140 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 POLR2HP52434 150 aaKnown RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 CDH13P55290 713 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 CLDN17P56750 224 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 FGF12P61328 243 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 SCN1BQ07699 218 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 C1DQ13901 141 aaKnown RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 ZNF674Q2M3X9 581 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 C6orf141Q5SZD1 244 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 CLEC6AQ6EIG7 209 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 SLC35E4Q6ICL7 350 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 FAM71E1Q6IPT2 247 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 UNQ6126/PRO20091Q6UXV3 157 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 HIST3H2AQ7L7L0 130 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 LINGO2Q7L985 606 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 LRRC28Q86X40 367 aaPredicted RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 EPHX4Q8IUS5 362 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 LYG1Q8N1E2 194 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 DPP10Q8N608 796 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 ARFGAP2Q8N6H7 521 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 GJC3Q8NFK1 279 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 TSPAN14Q8NG11 270 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 OR2T6Q8NHC8 308 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 ZNF519Q8TB69 540 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 CIDECQ96AQ7 238 aaPredicted RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 RNF183Q96D59 192 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 RRNAD1Q96FB5 475 aaKnown RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 ACPTQ9BZG2 426 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 MMP28Q9H239 520 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 MAP6D1Q9H9H5 199 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 B3GAT2Q9NPZ5 323 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 CYSLTR2Q9NS75 346 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 TMEM106BQ9NUM4 274 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 RPUSD1Q9UJJ7 312 aaKnown RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 VPREB3Q9UKI3 123 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 RASD1Q9Y272 281 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 SLC35A3Q9Y2D2 325 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 POFUT2Q9Y2G5 429 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 POLR3HQ9Y535 204 aaPredicted RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 CEPT1Q9Y6K0 416 aa3.98□□□□□ -1.77
SFXN1-202ENST00000421887 EPPK1P58107 5090 aaKnown RBP3.98□□□□□ -1.77
SFXN1-202ENST00000421887 BIRC6Q9NR09 4857 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 A0A0U1RQK1 487 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 KIR2DS1A0A191URI9 304 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 TMEM72A0PK05 275 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 ZNF320A2RRD8 509 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 DUXAA6NLW8 204 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 H0YAE9 185 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 M0R3G1 203 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 P2RY10O00398 339 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 ENSAO43768 121 aaKnown RBP3.97□□□□□ -1.77
SFXN1-202ENST00000421887 MGRN1O60291 552 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 STX11O75558 287 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 SUPT7LO94864 414 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 CLIC3O95833 236 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 PTHP01270 115 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 SERPINA5P05154 406 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 C2P06681 752 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 ETFAP13804 333 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 B4GALT1P15291 398 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 SSTR1P30872 391 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 CCT3P49368 545 aaKnown RBP3.97□□□□□ -1.77
SFXN1-202ENST00000421887 NPY4RP50391 375 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 UCP2P55851 309 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 TNFAIP6P98066 277 aaPredicted RBP3.97□□□□□ -1.77
SFXN1-202ENST00000421887 PMS2P3Q13401 168 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 FASTKD3Q14CZ7 662 aaKnown RBP3.97□□□□□ -1.77
SFXN1-202ENST00000421887 SNAPC1Q16533 368 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 TBC1D28Q2M2D7 210 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 CDONQ4KMG0 1287 aa3.97□□□□□ -1.77
SFXN1-202ENST00000421887 ALG10Q5BKT4 473 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms