RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 PSKH1P11801 424 aa13.9□□□□□ -0.18
LINC00404-201ENST00000418660 ENTPD1P49961 510 aa13.9□□□□□ -0.18
LINC00404-201ENST00000418660 GK2Q14410 553 aaPredicted RBP13.9□□□□□ -0.18
LINC00404-201ENST00000418660 DCXRQ7Z4W1 244 aa13.9□□□□□ -0.18
LINC00404-201ENST00000418660 ZNF511Q8NB15 262 aa13.9□□□□□ -0.18
LINC00404-201ENST00000418660 PAPD5Q8NDF8 572 aaKnown RBP13.9□□□□□ -0.18
LINC00404-201ENST00000418660 SLCO4A1Q96BD0 722 aa13.9□□□□□ -0.18
LINC00404-201ENST00000418660 GCM1Q9NP62 436 aa13.9□□□□□ -0.18
LINC00404-201ENST00000418660 G6PC2Q9NQR9 355 aa13.9□□□□□ -0.18
LINC00404-201ENST00000418660 TMEM100Q9NV29 134 aa13.9□□□□□ -0.18
LINC00404-201ENST00000418660 FBN1P35555 2871 aaKnown RBP13.89□□□□□ -0.19
LINC00404-201ENST00000418660 TANC2Q9HCD6 1990 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 A0A1B0GWJ7 208 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 IFNL4K9M1U5 179 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 ZNF593O00488 134 aaPredicted RBP13.89□□□□□ -0.19
LINC00404-201ENST00000418660 GSC2O15499 205 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 FKBP6O75344 327 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 E2F6O75461 281 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 OTX1P32242 354 aaPredicted RBP13.89□□□□□ -0.19
LINC00404-201ENST00000418660 SRP9P49458 86 aaKnown RBP13.89□□□□□ -0.19
LINC00404-201ENST00000418660 CBX1P83916 185 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 HNRNPA0Q13151 305 aaKnown RBP13.89□□□□□ -0.19
LINC00404-201ENST00000418660 LINC01590Q5TEZ4 76 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 FAHD2BQ6P2I3 314 aaPredicted RBP13.89□□□□□ -0.19
LINC00404-201ENST00000418660 DRAM2Q6UX65 266 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 IQCF1Q8N6M8 205 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 BHLHE23Q8NDY6 225 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 OR10AD1Q8NGE0 317 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 OR6K6Q8NGW6 343 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 SLAMF6Q96DU3 332 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 FAHD2AQ96GK7 314 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 MEGF10Q96KG7 1140 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 SIGLEC11Q96RL6 698 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 ZNF556Q9HAH1 456 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 UBAP1Q9NZ09 502 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 DNAJB9Q9UBS3 223 aa13.89□□□□□ -0.19
LINC00404-201ENST00000418660 FAM183AA6NL82 134 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 H0YL77 283 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 TMEM178BH3BS89 294 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 MLNRO43193 412 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 PNPP00491 289 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 OSMP13725 252 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 POU1F1P28069 291 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 SLC6A9P48067 706 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 PRSS12P56730 875 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 BNIP1Q12981 228 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 TAF13Q15543 124 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 TMEM155Q4W5P6 130 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 PGAP1Q75T13 922 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 MRPL21Q7Z2W9 205 aaKnown RBP13.88□□□□□ -0.19
LINC00404-201ENST00000418660 LRRC28Q86X40 367 aaPredicted RBP13.88□□□□□ -0.19
LINC00404-201ENST00000418660 PHC2Q8IXK0 858 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 SPICQ8N5J4 248 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 RFLNBQ8N5W9 214 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 ST7LQ8TDW4 575 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 KCNJ15Q99712 375 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 COPS4Q9BT78 406 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 CADM1Q9BY67 442 aaKnown RBP13.88□□□□□ -0.19
LINC00404-201ENST00000418660 MED20Q9H944 212 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 CENPMQ9NSP4 180 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 METRNQ9UJH8 293 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 PCDHB10Q9UN67 800 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 CUBNO60494 3623 aa13.88□□□□□ -0.19
LINC00404-201ENST00000418660 A0A0G2JMP0 313 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 A0A0X1KG70 313 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 ZNF878C9JN71 531 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 F5H5P2 479 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 ANXA8P13928 327 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 PAICSP22234 425 aaKnown RBP13.87□□□□□ -0.19
LINC00404-201ENST00000418660 RBMXP38159 391 aaKnown RBP13.87□□□□□ -0.19
LINC00404-201ENST00000418660 MMP16P51512 607 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 BTG1P62324 171 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 GINS1Q14691 196 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 SNAI3Q3KNW1 292 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 SHQ1Q6PI26 577 aaKnown RBP13.87□□□□□ -0.19
LINC00404-201ENST00000418660 ZNF771Q7L3S4 317 aaPredicted RBP13.87□□□□□ -0.19
LINC00404-201ENST00000418660 HS3ST5Q8IZT8 346 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 KLHL36Q8N4N3 616 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 TEX29Q8N6K0 151 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 OR4M2Q8NGB6 313 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 SPRYD4Q8WW59 207 aaPredicted RBP13.87□□□□□ -0.19
LINC00404-201ENST00000418660 OTULINQ96BN8 352 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 PATZ1Q9HBE1 687 aaKnown RBP13.87□□□□□ -0.19
LINC00404-201ENST00000418660 COL6A5A8TX70 2615 aa13.87□□□□□ -0.19
LINC00404-201ENST00000418660 MXRA5Q9NR99 2828 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 J3QLI3 93 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 FOXH1O75593 365 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 GLCEO94923 617 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 HMGN1P05114 100 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 PRKACGP22612 351 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 GATA3P23771 443 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 GSTT1P30711 240 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 MDH2P40926 338 aaKnown RBP13.86□□□□□ -0.19
LINC00404-201ENST00000418660 SLC15A1P46059 708 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 PRKXP51817 358 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 CDK5Q00535 292 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 ZNF92Q03936 586 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 EIF2B1Q14232 305 aaKnown RBP13.86□□□□□ -0.19
LINC00404-201ENST00000418660 ZMYND11Q15326 602 aa13.86□□□□□ -0.19
LINC00404-201ENST00000418660 ZNF181Q2M3W8 571 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms