RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 IL3P08700 152 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ADRA2AP08913 450 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ALPIP09923 528 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ANKRD34CP0C6C1 535 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ACSM4P0C7M7 580 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 LIMS3P0CW19 117 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 LIMS4P0CW20 117 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 C1GALT1C1LP0DN25 315 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 POU2F1P14859 743 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ELK1P19419 428 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 PAICSP22234 425 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 HTR1FP30939 366 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 CCR7P32248 378 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 BTCP35070 178 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 RORAP35398 523 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 FAUP35544 74 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 HSD17B2P37059 387 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 FRKP42685 505 aaPredicted RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 SLC1A3P43003 542 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 CBX5P45973 191 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TGM4P49221 684 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 PGFP49763 221 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 KHKP50053 298 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 BLVRAP53004 296 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 LIM2P55344 173 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 CTBP2P56545 445 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 GMFBP60983 142 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TSPAN5P62079 268 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TRA2BP62995 288 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 ACTC1P68032 377 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ACTA1P68133 377 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ST3GAL3Q11203 375 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SNTB2Q13425 540 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 GK2Q14410 553 aaPredicted RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 NFE2L1Q14494 772 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 GANABQ14697 944 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 TRAM2Q15035 370 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 P2RY14Q15391 338 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MPPED2Q15777 294 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 CHRNA6Q15825 494 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MAPK14Q16539 360 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 CDKN3Q16667 212 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 DUSP5Q16690 384 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SLC5A12Q1EHB4 618 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 GSG1Q2KHT4 349 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 KRTAP27-1Q3LI81 207 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 LGALSLQ3ZCW2 172 aaPredicted RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 ZNF311Q5JNZ3 666 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 UBE2NLQ5JXB2 153 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 IDNKQ5T6J7 187 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 BCL2L15Q5TBC7 163 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ATP1A1-AS1Q5TC04 95 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 AADACL4Q5VUY2 407 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 RAET1GQ6H3X3 334 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 RPL13AP3Q6NVV1 102 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SFXN4Q6P4A7 337 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 PODNL1Q6PEZ8 512 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ZNF613Q6PF04 617 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 AGTRAPQ6RW13 159 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SMARCD3Q6STE5 483 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ZNF322Q6U7Q0 402 aaPredicted RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 UQCC3Q6UW78 93 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TFAP2EQ6VUC0 442 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TMEM64Q6YI46 380 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 C3P1Q6ZMU1 363 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 FRRS1Q6ZNA5 592 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MBOAT1Q6ZNC8 495 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MOB2Q70IA6 237 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 UTS2BQ765I0 119 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 COMMD6Q7Z4G1 85 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ZER1Q7Z7L7 766 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TMEM17Q86X19 198 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 CATSPERDQ86XM0 798 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MEX3DQ86XN8 651 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 PDZD9Q8IXQ8 264 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 LINC00518Q8N0U6 118 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 UBE2J2Q8N2K1 259 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 FTMTQ8N4E7 242 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TBC1D19Q8N5T2 526 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 CLDN19Q8N6F1 224 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ZNF485Q8NCK3 441 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 GPR26Q8NDV2 337 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 OR11H7Q8NGC8 314 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 OR4K5Q8NGD3 323 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 OR2AP1Q8NGE2 309 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 PIGXQ8TBF5 258 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SFXN5Q8TD22 340 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 HAVCR2Q8TDQ0 301 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 C16orf78Q8WTQ4 265 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SMIM4Q8WVI0 70 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TMEM159Q96B96 161 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MRPL48Q96GC5 212 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 RBP7Q96R05 134 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SECISBP2Q96T21 854 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 UQCC2Q9BRT2 126 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 UTP23Q9BRU9 249 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 ALKBH7Q9BT30 221 aaPredicted RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 ZNF416Q9BWM5 594 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 FAIM2Q9BWQ8 316 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 PINK1Q9BXM7 581 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms