RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ALKBH6Q3KRA9 238 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 TTC23Q5W5X9 447 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 DEGS2Q6QHC5 323 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 ZNF771Q7L3S4 317 aaPredicted RBP19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 KRT77Q7Z794 578 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 ZCCHC24Q8N2G6 241 aaKnown RBP19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 Q96MF0 132 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 Q96MT0 163 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 AMELYQ99218 206 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 POFUT1Q9H488 388 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 ADGRL4Q9HBW9 690 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 MYOZ1Q9NP98 299 aaPredicted RBP19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 CLN6Q9NWW5 311 aa19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 PURGQ9UJV8 347 aaKnown RBP19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 PRRC2AP48634 2157 aaKnown RBP19.75■□□□□ 0.75
SMARCB1-205ENST00000417137 ARID1AO14497 2285 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 C17orf100A8MU93 164 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 ZNF670-ZNF695F2Z2N8 137 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 CSF3P09919 207 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 SBK2P0C263 348 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 SELEP16581 610 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 CX3CR1P49238 355 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 ZNF81P51508 661 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 CLEC2AQ6UVW9 174 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 SLC35F2Q8IXU6 374 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 OR51G2Q8NGK0 314 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 RHNO1Q9BSD3 238 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 MROQ9BYG7 248 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 TPK1Q9H3S4 243 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 RNPEPL1Q9HAU8 725 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 CELSR1Q9NYQ6 3014 aa19.74■□□□□ 0.75
SMARCB1-205ENST00000417137 DLGAP1O14490 977 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 ENTPD6O75354 484 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 ZNF254O75437 659 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 ANXA2P07355 339 aaKnown RBP19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 DHRSXQ8N5I4 330 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 RHOXF1Q8NHV9 184 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 DIRC2Q96SL1 478 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 NKIRAS2Q9NYR9 191 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 NKX1-2Q9UD57 310 aaPredicted RBP19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 ZDHHC8Q9ULC8 765 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 KLHDC2Q9Y2U9 406 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 N6AMT1Q9Y5N5 214 aa19.73■□□□□ 0.75
SMARCB1-205ENST00000417137 HIVEP1P15822 2718 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 OR2T7P0C7T2 308 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 MTNR1AP48039 350 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 MMP15P51511 669 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 HLXQ14774 488 aaPredicted RBP19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 LRRN1Q6UXK5 716 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 MRPL21Q7Z2W9 205 aaKnown RBP19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 ENTHD1Q8IYW4 607 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 OR52H1Q8NGJ2 320 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 OR2T27Q8NH04 317 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 CYGBQ8WWM9 190 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 OPA3Q9H6K4 179 aa19.72■□□□□ 0.75
SMARCB1-205ENST00000417137 XRCC2O43543 280 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 SLC2A1P11166 492 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 PDLIM4P50479 330 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 CXCR4P61073 352 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 ROM1Q03395 351 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 GK2Q14410 553 aaPredicted RBP19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 ZNF322Q6U7Q0 402 aaPredicted RBP19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 USP51Q70EK9 711 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 PGAP1Q75T13 922 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 ZNF679Q8IYX0 411 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 UBASH3BQ8TF42 649 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 FAM168AQ92567 244 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 DECR2Q9NUI1 292 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 IKZF2Q9UKS7 526 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 COPS3Q9UNS2 423 aa19.71■□□□□ 0.75
SMARCB1-205ENST00000417137 TPD52L2O43399 206 aaKnown RBP19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 TBX1O43435 398 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 CD99P14209 185 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 DAOP14920 347 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 GABRB1P18505 474 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 DCTDP32321 178 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 ZNF121P58317 390 aaPredicted RBP19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 EGR3Q06889 387 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 SNAI3Q3KNW1 292 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 FAM209AQ5JX71 171 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 OR2T2Q6IF00 324 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 DNM1P46Q6ZS02 220 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 ZNF525Q8N782 197 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 SETD9Q8NE22 299 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 OR8B4Q96RC9 309 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 OR10A2Q9H208 303 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 LRP12Q9Y561 859 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 PCDHGB1Q9Y5G3 927 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 SETD2Q9BYW2 2564 aaPredicted RBP19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 ARFGEF3Q5TH69 2177 aa19.7■□□□□ 0.74
SMARCB1-205ENST00000417137 LOC390937A0A1W2PQ73 354 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 ACOD1A6NK06 481 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 SPRY3O43610 288 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 LY6HO94772 140 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 TNFSF4P23510 183 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 CFL1P23528 166 aaKnown RBP19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 RIDAP52758 137 aaKnown RBP19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 IL5RAQ01344 420 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 IL18R1Q13478 541 aa19.69■□□□□ 0.74
SMARCB1-205ENST00000417137 TMEM255AQ5JRV8 349 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms