RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DEFB108BQ8NET1 73 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 OR9Q2Q8NGE9 314 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 ZNF420Q8TAQ5 688 aaPredicted RBP14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 SPTSSAQ969W0 71 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 SLC6A7Q99884 636 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 BTBD10Q9BSF8 475 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 MRI1Q9BV20 369 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 TMEM165Q9HC07 324 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 MIOXQ9UGB7 285 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 LRCH1Q9Y2L9 728 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 INSIG2Q9Y5U4 225 aa14.77□□□□□ -0.05
PDLIM2-208ENST00000416159 B2RBV5 119 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 F5H5P2 479 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 FSTL3O95633 263 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 CYB5R3P00387 301 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 GASTP01350 101 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 ATP6V1B2P21281 511 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 PYCR1P32322 319 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 MAGEA2P43356 314 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 ARMCX4Q5H9R4 360 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 ZNF770Q6IQ21 691 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 PGAP1Q75T13 922 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 MOGAT3Q86VF5 341 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 CELF2-AS1Q8N7Q2 184 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 CYB561A3Q8NBI2 242 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 PROKR2Q8NFJ6 384 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 OR4C15Q8NGM1 316 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 GCDHQ92947 438 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 DVL3Q92997 716 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 ERGIC1Q969X5 290 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 SLCO4A1Q96BD0 722 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 NSL1Q96IY1 281 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 MAP6Q96JE9 813 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 MUC13Q9H3R2 512 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 MAGIXQ9H6Y5 334 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 NTN4Q9HB63 628 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 OR5V1Q9UGF6 321 aa14.76□□□□□ -0.05
PDLIM2-208ENST00000416159 TMEM89A2RUT3 159 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 M0R135 149 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 GATA4P43694 442 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 COMPP49747 757 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 ZNF362Q5T0B9 420 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 MRPL21Q7Z2W9 205 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 LNX2Q8N448 690 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 SLC37A3Q8NCC5 494 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 SPRYD4Q8WW59 207 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 ZNF799Q96GE5 643 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 SSBP3Q9BWW4 388 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 TSSK6Q9BXA6 273 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 PLA2G12AQ9BZM1 189 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 SLC22A4Q9H015 551 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 NUP50Q9UKX7 468 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 BAIAP2Q9UQB8 552 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 NOP16Q9Y3C1 178 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 PPIAL4AQ9Y536 164 aa14.75□□□□□ -0.05
PDLIM2-208ENST00000416159 TCRBV5S2A0A599 114 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 TVP23AA6NH52 213 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 ZNF205O95201 554 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 HLA-DPB1P04440 258 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 IRF2P14316 349 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 RPS2P15880 293 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 CFPP27918 469 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 PMELP40967 661 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 PAX8Q06710 450 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 LCN8Q6JVE9 175 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 RBMS3Q6XE24 437 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 DHFR2Q86XF0 187 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 KLBQ86Z14 1044 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 FITM2Q8N6M3 262 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 ZDHHC22Q8N966 263 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 OR8D4Q8NGM9 314 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 OR10S1Q8NGN2 331 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 OR11L1Q8NGX0 322 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 C22orf15Q8WYQ4 148 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 NEIL1Q96FI4 390 aaPredicted RBP14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 PLEKHA8Q96JA3 519 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 TMEM246Q9BRR3 403 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 DDX28Q9NUL7 540 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 TBC1D23Q9NUY8 699 aa14.74□□□□□ -0.05
PDLIM2-208ENST00000416159 IGHV3-64DA0A0J9YX35 117 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 FMO3P31513 532 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 OTX1P32242 354 aaPredicted RBP14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 CD200P41217 278 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 RAD23AP54725 363 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 PRSS12P56730 875 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 GNB2P62879 340 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 PPP1R8Q12972 351 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 MAB21L1Q13394 359 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 TRIM25Q14258 630 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 MICAQ29983 383 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 ZNF404Q494X3 552 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 FAM98BQ52LJ0 330 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 OR2T5Q6IEZ7 315 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 DRAM2Q6UX65 266 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 BTNL3Q6UXE8 466 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 LRRN1Q6UXK5 716 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 AQP11Q8NBQ7 271 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 OR51L1Q8NGJ5 315 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 OR2T29Q8NH02 315 aa14.73□□□□□ -0.05
PDLIM2-208ENST00000416159 Q8TCH9 128 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms