RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 OTOGQ6ZRI0 2925 aa12.53□□□□□ -0.4
LIMS1-206ENST00000414829 LOC100130705A0A1B0GUX0 176 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 ACOD1A6NK06 481 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 M0R129 80 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 SLC16A6O15403 523 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 CLPTM1O96005 669 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 ANXA2P07355 339 aaKnown RBP12.52□□□□□ -0.41
LIMS1-206ENST00000414829 ADH4P08319 380 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 CD99P14209 185 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 PEX2P28328 305 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 DCTDP32321 178 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 MPV17P39210 176 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 CX3CR1P49238 355 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 PSMA6P60900 246 aaKnown RBP12.52□□□□□ -0.41
LIMS1-206ENST00000414829 ACTC1P68032 377 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 ACTA1P68133 377 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 ROM1Q03395 351 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 EGR3Q06889 387 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 MAD2L1BPQ15013 274 aaPredicted RBP12.52□□□□□ -0.41
LIMS1-206ENST00000414829 OCLNQ16625 522 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF829Q3KNS6 432 aaPredicted RBP12.52□□□□□ -0.41
LIMS1-206ENST00000414829 TTC23Q5W5X9 447 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 LRP11Q86VZ4 500 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 FTMTQ8N4E7 242 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 SETD9Q8NE22 299 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 CMBLQ96DG6 245 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF582Q96NG8 517 aaPredicted RBP12.52□□□□□ -0.41
LIMS1-206ENST00000414829 SLC29A1Q99808 456 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 SLC22A4Q9H015 551 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 OR10A2Q9H208 303 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 TPK1Q9H3S4 243 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 DECR2Q9NUI1 292 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 PTTG3PQ9NZH4 202 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 MYEF2Q9P2K5 600 aaKnown RBP12.52□□□□□ -0.41
LIMS1-206ENST00000414829 PCDHGB1Q9Y5G3 927 aa12.52□□□□□ -0.41
LIMS1-206ENST00000414829 IQCF6A8MYZ5 107 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 E9PQ18 207 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 TPD52L2O43399 206 aaKnown RBP12.51□□□□□ -0.41
LIMS1-206ENST00000414829 NDUFS7O75251 213 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 MRPL3P09001 348 aaKnown RBP12.51□□□□□ -0.41
LIMS1-206ENST00000414829 SBK2P0C263 348 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 OR2T7P0C7T2 308 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 NAT2P11245 290 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 PSKH1P11801 424 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 DAOP14920 347 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 DDOSTP39656 456 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 MTNR1AP48039 350 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 MMP15P51511 669 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 PRKXP51817 358 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 RIDAP52758 137 aaKnown RBP12.51□□□□□ -0.41
LIMS1-206ENST00000414829 PSG7Q13046 419 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 LRRC36Q1X8D7 754 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-206ENST00000414829 DNM1P46Q6ZS02 220 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 SLC35F2Q8IXU6 374 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF679Q8IYX0 411 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF525Q8N782 197 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 OR2T27Q8NH04 317 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 UBASH3BQ8TF42 649 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 RDH5Q92781 318 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 HEATR1Q9H583 2144 aaKnown RBP12.51□□□□□ -0.41
LIMS1-206ENST00000414829 MOB1AQ9H8S9 216 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 SAP30LQ9HAJ7 183 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 RNPEPL1Q9HAU8 725 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 ADGRL4Q9HBW9 690 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 DLL4Q9NR61 685 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 FAM118AQ9NWS6 357 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 DNAJC27Q9NZQ0 273 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 USF3Q68DE3 2245 aa12.51□□□□□ -0.41
LIMS1-206ENST00000414829 PRRC2AP48634 2157 aaKnown RBP12.5□□□□□ -0.41
LIMS1-206ENST00000414829 CD55P08174 381 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 SLC34A1Q06495 639 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 IL18R1Q13478 541 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 TIGD6Q17RP2 521 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 RSPO1Q2MKA7 263 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF322Q6U7Q0 402 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-206ENST00000414829 SPATC1Q76KD6 591 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF786Q8N393 782 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 GALNT4Q8N4A0 578 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 OR51G2Q8NGK0 314 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 OR13G1Q8NGZ3 307 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-206ENST00000414829 ELMOD3Q96FG2 381 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 C18orf12Q96KH6 178 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 COX4I2Q96KJ9 171 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 TMUB1Q9BVT8 246 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 CHODLQ9H9P2 273 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 IKZF2Q9UKS7 526 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 ARID1AO14497 2285 aa12.5□□□□□ -0.41
LIMS1-206ENST00000414829 IFNL4K9M1U5 179 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 TBX1O43435 398 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 KRT8P05787 483 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 TNFRSF1AP19438 455 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 ACHEP22303 614 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 ZNF121P58317 390 aaPredicted RBP12.49□□□□□ -0.41
LIMS1-206ENST00000414829 CXCR4P61073 352 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 MZT1Q08AG7 82 aa12.49□□□□□ -0.41
LIMS1-206ENST00000414829 GK2Q14410 553 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 297 ms