RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SLC6A9P48067 706 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 CRISP1P54107 249 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 HNRNPA0Q13151 305 aaKnown RBP15.97■□□□□ 0.15
TRIM56-202ENST00000412507 CCDC121Q6ZUS5 278 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 SPATC1Q76KD6 591 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 CPOQ8IVL8 374 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 OR6N2Q8NGY6 317 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 ST7LQ8TDW4 575 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 DNAJC9Q8WXX5 260 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 LRTOMTQ8WZ04 291 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 PLEKHA8Q96JA3 519 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 COPS4Q9BT78 406 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 SLC25A19Q9HC21 320 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 KCNS2Q9ULS6 477 aa15.97■□□□□ 0.15
TRIM56-202ENST00000412507 CLDN25C9JDP6 229 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 ANOS1P23352 680 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 TNFSF4P23510 183 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 IGFBP5P24593 272 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 OTX1P32242 354 aaPredicted RBP15.96■□□□□ 0.15
TRIM56-202ENST00000412507 PRKXP51817 358 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 EIF2B1Q14232 305 aaKnown RBP15.96■□□□□ 0.15
TRIM56-202ENST00000412507 GK2Q14410 553 aaPredicted RBP15.96■□□□□ 0.15
TRIM56-202ENST00000412507 TAF13Q15543 124 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 CHRFAM7AQ494W8 412 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 DPY19L4Q7Z388 723 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 LINC01356Q8N9X3 169 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 BHLHE23Q8NDY6 225 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 OR8G5Q8NG78 346 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 ZMYND19Q96E35 227 aaPredicted RBP15.96■□□□□ 0.15
TRIM56-202ENST00000412507 MARCH7Q9H992 704 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 TMEM160Q9NX00 188 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 WIPI2Q9Y4P8 454 aa15.96■□□□□ 0.15
TRIM56-202ENST00000412507 MXRA5Q9NR99 2828 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 IQCF6A8MYZ5 107 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 FAM157AC9JC47 383 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 ZNF878C9JN71 531 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 G3V2T6 193 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 MITFO75030 526 aaPredicted RBP15.95■□□□□ 0.14
TRIM56-202ENST00000412507 RBMXP38159 391 aaKnown RBP15.95■□□□□ 0.14
TRIM56-202ENST00000412507 CDH15P55291 814 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 MALLQ13021 153 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 KLHL12Q53G59 568 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 DRAM2Q6UX65 266 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 TIGD4Q8IY51 512 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 PARP8Q8N3A8 854 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 BBS1Q8NFJ9 593 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 ITLN1Q8WWA0 313 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 C1orf159Q96HA4 380 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 ZNF582Q96NG8 517 aaPredicted RBP15.95■□□□□ 0.14
TRIM56-202ENST00000412507 KCNJ15Q99712 375 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 TEX12Q9BXU0 123 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 KRT84Q9NSB2 600 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 DCAF16Q9NXF7 216 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 TVP23BQ9NYZ1 205 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 IL19Q9UHD0 177 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 SVEP1Q4LDE5 3571 aa15.95■□□□□ 0.14
TRIM56-202ENST00000412507 C5orf63A6NC05 138 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 H0YL77 283 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 SLC2A1P11166 492 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 FCGR1AP12314 374 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 SELEP16581 610 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 TNFRSF1AP19438 455 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 LMO4P61968 165 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 PTGES3Q15185 160 aaKnown RBP15.94■□□□□ 0.14
TRIM56-202ENST00000412507 SNAPC1Q16533 368 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 SNAI3Q3KNW1 292 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 PGAP1Q75T13 922 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 CXXC5Q7LFL8 322 aaKnown RBP15.94■□□□□ 0.14
TRIM56-202ENST00000412507 SHFQ7M4L6 423 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 ZNF283Q8N7M2 679 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 OR10AD1Q8NGE0 317 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 OR13G1Q8NGZ3 307 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 OR2AE1Q8NHA4 323 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 RAB1CQ92928 201 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 TIMD4Q96H15 378 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 OR2V2Q96R30 315 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 ABHD6Q9BV23 337 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 BEX2Q9BXY8 128 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 SEMA6AQ9H2E6 1030 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 CDC42EP3Q9UKI2 254 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 N6AMT1Q9Y5N5 214 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 CUBNO60494 3623 aa15.94■□□□□ 0.14
TRIM56-202ENST00000412507 MLNRO43193 412 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 PRODHO43272 600 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 SELENOFO60613 162 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 RPS7P62081 194 aaKnown RBP15.93■□□□□ 0.14
TRIM56-202ENST00000412507 ESRRGP62508 458 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 SLC3A1Q07837 685 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 ZSCAN26Q16670 478 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 IL17RELQ6ZVW7 336 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 MRPL21Q7Z2W9 205 aaKnown RBP15.93■□□□□ 0.14
TRIM56-202ENST00000412507 ZDHHC13Q8IUH4 622 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 RNF133Q8WVZ7 376 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 AMELYQ99218 206 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 SLC30A2Q9BRI3 323 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 SHARPINQ9H0F6 387 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 GABARAPL1Q9H0R8 117 aa15.93■□□□□ 0.14
TRIM56-202ENST00000412507 KIAA1324LA8MWY0 1029 aaPredicted RBP15.92■□□□□ 0.14
TRIM56-202ENST00000412507 SLC2A5P22732 501 aa15.92■□□□□ 0.14
TRIM56-202ENST00000412507 NAA10P41227 235 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms