RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 GRB2P62993 217 aaKnown RBP11.21□□□□□ -0.61
HDAC8-210ENST00000412342 GK2Q14410 553 aaPredicted RBP11.21□□□□□ -0.61
HDAC8-210ENST00000412342 TRIP10Q15642 601 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 MOGQ16653 247 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 SLC25A30Q5SVS4 291 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 LPCAT4Q643R3 524 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 CLEC2AQ6UVW9 174 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 ZNF786Q8N393 782 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 OR5L1Q8NGL2 311 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 SNX33Q8WV41 574 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 TRUB1Q8WWH5 349 aaKnown RBP11.21□□□□□ -0.61
HDAC8-210ENST00000412342 C18orf12Q96KH6 178 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 ZNF582Q96NG8 517 aaPredicted RBP11.21□□□□□ -0.61
HDAC8-210ENST00000412342 RDH12Q96NR8 316 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 CNN2Q99439 309 aaKnown RBP11.21□□□□□ -0.61
HDAC8-210ENST00000412342 MYOZ1Q9NP98 299 aaPredicted RBP11.21□□□□□ -0.61
HDAC8-210ENST00000412342 DNAJC27Q9NZQ0 273 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 GPR160Q9UJ42 338 aa11.21□□□□□ -0.61
HDAC8-210ENST00000412342 A0A1B0GWJ7 208 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 LYNX1G3V0Z9 82 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 SLC16A6O15403 523 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 LILRA1O75019 489 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 RP2O75695 350 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 CD55P08174 381 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 SBK2P0C263 348 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 LYNX1P0DP58 116 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 SLC2A1P11166 492 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 GIFP27352 417 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 LIPAP38571 399 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 SLC15A1P46059 708 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 SLC6A9P48067 706 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 CX3CR1P49238 355 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 PDLIM4P50479 330 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 ZNF81P51508 661 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 PRSS12P56730 875 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 ROM1Q03395 351 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 CDK5R2Q13319 367 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 PCGF3Q3KNV8 242 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 GLYATL3Q5SZD4 288 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 OGFRL1Q5TC84 451 aaPredicted RBP11.2□□□□□ -0.62
HDAC8-210ENST00000412342 OR2T2Q6IF00 324 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 LRRN1Q6UXK5 716 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 UBASH3BQ8TF42 649 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 THEM6Q8WUY1 208 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 FAM168AQ92567 244 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 YIPF5Q969M3 257 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 REG4Q9BYZ8 158 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 MSL2Q9HCI7 577 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 CYSLTR2Q9NS75 346 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 FAM118AQ9NWS6 357 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 SMPD3Q9NY59 655 aaPredicted RBP11.2□□□□□ -0.62
HDAC8-210ENST00000412342 H2AFY2Q9P0M6 372 aaPredicted RBP11.2□□□□□ -0.62
HDAC8-210ENST00000412342 ZNF319Q9P2F9 582 aa11.2□□□□□ -0.62
HDAC8-210ENST00000412342 WARS2Q9UGM6 360 aaKnown RBP11.2□□□□□ -0.62
HDAC8-210ENST00000412342 LOC100130705A0A1B0GUX0 176 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 LOC390937A0A1W2PQ73 354 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 IQCF6A8MYZ5 107 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 NDUFS8O00217 210 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 TIMM8AO60220 97 aaPredicted RBP11.19□□□□□ -0.62
HDAC8-210ENST00000412342 ENTPD6O75354 484 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 ERCC1P07992 297 aaPredicted RBP11.19□□□□□ -0.62
HDAC8-210ENST00000412342 INHBBP09529 407 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 H2BFMP0C1H6 154 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 SLC25A16P16260 332 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 COL8A2P25067 703 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 ZNF121P58317 390 aaPredicted RBP11.19□□□□□ -0.62
HDAC8-210ENST00000412342 PSMA6P60900 246 aaKnown RBP11.19□□□□□ -0.62
HDAC8-210ENST00000412342 CCL8P80075 99 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 MRPS11P82912 194 aaKnown RBP11.19□□□□□ -0.62
HDAC8-210ENST00000412342 ZNF92Q03936 586 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 KRTAP1-1Q07627 177 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 TMED1Q13445 227 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 RIN1Q13671 783 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 TAF13Q15543 124 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 OCLNQ16625 522 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 FAM209AQ5JX71 171 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 SLC35F2Q8IXU6 374 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 ENTHD1Q8IYW4 607 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 PACRGLQ8N7B6 248 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 ZNF283Q8N7M2 679 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 OR51G2Q8NGK0 314 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 OR2AE1Q8NHA4 323 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 SPSB4Q96A44 273 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 OR8B4Q96RC9 309 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 SMR3AQ99954 134 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 RHNO1Q9BSD3 238 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 REPIN1Q9BWE0 567 aaKnown RBP11.19□□□□□ -0.62
HDAC8-210ENST00000412342 C8orf4Q9NR00 106 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 CLN6Q9NWW5 311 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 IMPAD1Q9NX62 359 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 NKX1-2Q9UD57 310 aaPredicted RBP11.19□□□□□ -0.62
HDAC8-210ENST00000412342 AASSQ9UDR5 926 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 LAMP5Q9UJQ1 280 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 LRP12Q9Y561 859 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 GMPPBQ9Y5P6 360 aa11.19□□□□□ -0.62
HDAC8-210ENST00000412342 PLSCR5A0PG75 271 aa11.18□□□□□ -0.62
HDAC8-210ENST00000412342 J3QRE1 110 aa11.18□□□□□ -0.62
HDAC8-210ENST00000412342 MLNRO43193 412 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms