RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 SGCDQ92629 289 aa12.36□□□□□ -0.43
LIMS2-209ENST00000410038 APOBEC3DQ96AK3 386 aaPredicted RBP12.36□□□□□ -0.43
LIMS2-209ENST00000410038 ALG8Q9BVK2 526 aa12.36□□□□□ -0.43
LIMS2-209ENST00000410038 DUSP21Q9H596 190 aa12.36□□□□□ -0.43
LIMS2-209ENST00000410038 PLEKHF2Q9H8W4 249 aa12.36□□□□□ -0.43
LIMS2-209ENST00000410038 STARD10Q9Y365 291 aa12.36□□□□□ -0.43
LIMS2-209ENST00000410038 ARFGEF3Q5TH69 2177 aa12.36□□□□□ -0.43
LIMS2-209ENST00000410038 CSMD2Q7Z408 3487 aa12.36□□□□□ -0.43
LIMS2-209ENST00000410038 ANKRD17O75179 2603 aaKnown RBP12.36□□□□□ -0.43
LIMS2-209ENST00000410038 HS3ST1O14792 307 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 LCKP06239 509 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 C21orf33P30042 268 aaPredicted RBP12.35□□□□□ -0.43
LIMS2-209ENST00000410038 OR12D2P58182 307 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 ZNF121P58317 390 aaPredicted RBP12.35□□□□□ -0.43
LIMS2-209ENST00000410038 PSMA6P60900 246 aaKnown RBP12.35□□□□□ -0.43
LIMS2-209ENST00000410038 PPP1CBP62140 327 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 MSMPQ1L6U9 139 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 LIPNQ5VXI9 398 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 UNQ6126/PRO20091Q6UXV3 157 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 YIPF7Q8N8F6 280 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 FBXW5Q969U6 566 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 ZNF442Q9H7R0 627 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 BRD7Q9NPI1 651 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 GNG8Q9UK08 70 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 EXOSC1Q9Y3B2 195 aaKnown RBP12.35□□□□□ -0.43
LIMS2-209ENST00000410038 C5orf63A6NC05 138 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 J3QW42 95 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 SRSF10O75494 262 aaKnown RBP12.35□□□□□ -0.43
LIMS2-209ENST00000410038 PNPP00491 289 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 CDK1P06493 297 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 ANXA2P07355 339 aaKnown RBP12.35□□□□□ -0.43
LIMS2-209ENST00000410038 MYL12AP19105 171 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 RPS23P62266 143 aaKnown RBP12.35□□□□□ -0.43
LIMS2-209ENST00000410038 ACTA2P62736 377 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 ACTG2P63267 376 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 ADIPOQQ15848 244 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 SNAI3Q3KNW1 292 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 SPATA46Q5T0L3 261 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 KCTD20Q7Z5Y7 419 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 SYS1Q8N2H4 156 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 SLC25A40Q8TBP6 338 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 MYDGFQ969H8 173 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 MRPL48Q96GC5 212 aaKnown RBP12.35□□□□□ -0.43
LIMS2-209ENST00000410038 C4orf36Q96KX1 117 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 DHRS9Q9BPW9 319 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 POFUT1Q9H488 388 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 ISG20L2Q9H9L3 353 aaKnown RBP12.35□□□□□ -0.43
LIMS2-209ENST00000410038 UBTD1Q9HAC8 227 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 ACOXLQ9NUZ1 547 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 FAM206AQ9NX38 181 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 CLEC2DQ9UHP7 191 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 N6AMT1Q9Y5N5 214 aa12.35□□□□□ -0.43
LIMS2-209ENST00000410038 TMEM269A0A1B0GVZ9 245 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 J3QLW9 94 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 RPP14O95059 124 aaKnown RBP12.34□□□□□ -0.43
LIMS2-209ENST00000410038 TACSTD2P09758 323 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 ZNF19P17023 458 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 APOBEC3AP31941 199 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-209ENST00000410038 MMP16P51512 607 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 KRTAP10-9P60411 292 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 MFGE8Q08431 387 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-209ENST00000410038 ZNF829Q3KNS6 432 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-209ENST00000410038 RGS7BPQ6MZT1 257 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-209ENST00000410038 ZNF544Q6NX49 715 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 FAM57BQ71RH2 274 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 FAM220AQ7Z4H9 259 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 C1orf174Q8IYL3 243 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 ZNF611Q8N823 705 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 RORBQ92753 470 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 RNF166Q96A37 237 aaPredicted RBP12.34□□□□□ -0.43
LIMS2-209ENST00000410038 MARS2Q96GW9 593 aaKnown RBP12.34□□□□□ -0.43
LIMS2-209ENST00000410038 COG8Q96MW5 612 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 SIGLEC11Q96RL6 698 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 OR2J1Q9GZK6 312 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 ZNF319Q9P2F9 582 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 ERVK-18Q9QC07 812 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 BLOC1S6Q9UL45 172 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 CMAHPQ9Y471 501 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 R4GMQ9 66 aa12.34□□□□□ -0.43
LIMS2-209ENST00000410038 OR4A8P0C604 315 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 TTKP33981 857 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 FABP6P51161 128 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 OR2G6Q5TZ20 316 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 EGFL6Q8IUX8 553 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 OR5L1Q8NGL2 311 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 PELI1Q96FA3 418 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 YTHDF1Q9BYJ9 559 aaKnown RBP12.33□□□□□ -0.44
LIMS2-209ENST00000410038 SP140LQ9H930 580 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 CHCHD3Q9NX63 227 aaKnown RBP12.33□□□□□ -0.44
LIMS2-209ENST00000410038 PTTG3PQ9NZH4 202 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 FZR1Q9UM11 496 aa12.33□□□□□ -0.44
LIMS2-209ENST00000410038 CAB39Q9Y376 341 aaPredicted RBP12.33□□□□□ -0.44
LIMS2-209ENST00000410038 LOC110117498-PIK3R3F6TDL0 507 aa12.32□□□□□ -0.44
LIMS2-209ENST00000410038 TBX1O43435 398 aa12.32□□□□□ -0.44
LIMS2-209ENST00000410038 RGS10O43665 173 aa12.32□□□□□ -0.44
LIMS2-209ENST00000410038 DANCRP0C864 163 aa12.32□□□□□ -0.44
LIMS2-209ENST00000410038 ZNF250P15622 560 aa12.32□□□□□ -0.44
LIMS2-209ENST00000410038 TUBG1P23258 451 aa12.32□□□□□ -0.44
LIMS2-209ENST00000410038 SERPINF1P36955 418 aa12.32□□□□□ -0.44
LIMS2-209ENST00000410038 MPV17P39210 176 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms